RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-223	ENST00000542552		H3BSH0	61 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	GPR37	O15354	613 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	SYNGR1	O43759	233 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	CLIC3	O95833	236 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	HTR1A	P08908	422 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	PGA5	P0DJD9	388 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	IGHV4-38-2	P0DP08	117 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	PSG2	P11465	335 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	MMP9	P14780	707 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	GLRA1	P23415	457 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	HAAO	P46952	286 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	GABPB1	Q06547	395 aa	Predicted RBP	12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	BPIFB2	Q8N4F0	458 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	PNLDC1	Q8NA58	520 aa	Known RBP	12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	ZFAND2B	Q8WV99	257 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	PP6455	Q8WZ26	134 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	ST8SIA4	Q92187	359 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	TMIGD2	Q96BF3	282 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	MED30	Q96HR3	178 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	DMRTB1	Q96MA1	342 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	NRIP2	Q9BQI9	281 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	C19orf24	Q9BVV8	132 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	CHST5	Q9GZS9	411 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	PLEKHA1	Q9HB21	404 aa		12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	RPUSD1	Q9UJJ7	312 aa	Known RBP	12.78	□□□□□ -0.36
ECHDC2-223	ENST00000542552	SIGLEC5	O15389	551 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	NDUFB3	O43676	98 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	GATB	O75879	557 aa	Known RBP	12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	TFF1	P04155	84 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	LIMS3	P0CW19	117 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	LIMS4	P0CW20	117 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	SELL	P14151	372 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	IL13RA1	P78552	427 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	DGUOK	Q16854	277 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	ACP7	Q6ZNF0	438 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	CALHM1	Q8IU99	346 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	BCL6B	Q8N143	479 aa	Predicted RBP	12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	DHRSX	Q8N5I4	330 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	CNIH3	Q8TBE1	160 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	CYGB	Q8WWM9	190 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	C22orf15	Q8WYQ4	148 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	ADAT3	Q96EY9	351 aa	Predicted RBP	12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	SDSL	Q96GA7	329 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	ZNF488	Q96MN9	340 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	PKIB	Q9C010	78 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	SIRPD	Q9H106	197 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	DCLRE1B	Q9H816	532 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	HES4	Q9HCC6	221 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	SLC7A11	Q9UPY5	501 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	POLDIP2	Q9Y2S7	368 aa		12.77	□□□□□ -0.37
ECHDC2-223	ENST00000542552	IGKV1-27	A0A075B6S5	117 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	NKX6-3	A6NJ46	265 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552		E9PI62	339 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	RGS9	O75916	674 aa	Predicted RBP	12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	SERPINA3	P01011	423 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	SFTPB	P07988	381 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	FUT6	P51993	359 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	ERVK11-1	P61568	191 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	IL24	Q13007	206 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	MRPL28	Q13084	256 aa	Known RBP	12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	IKZF1	Q13422	519 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	IL18R1	Q13478	541 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	ALKBH1	Q13686	389 aa	Known RBP	12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	LRRC10	Q5BKY1	277 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	UTS2B	Q765I0	119 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	ANGPTL5	Q86XS5	388 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	DNAAF1	Q8NEP3	725 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	OR10AC1	Q8NH08	325 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	C8orf46	Q8TAG6	207 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	WDFY2	Q96P53	400 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	TBX15	Q96SF7	602 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	DCTN5	Q9BTE1	182 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	CNTD2	Q9H8S5	307 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	ESM1	Q9NQ30	184 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	HHLA2	Q9UM44	414 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	MAB21L2	Q9Y586	359 aa		12.76	□□□□□ -0.37
ECHDC2-223	ENST00000542552	IGKV1-9	A0A0C4DH69	117 aa		12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	FAM230A	A0A1W2PPH8	454 aa		12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552		H0YAE9	185 aa		12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	DCK	P27707	260 aa		12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	CAPG	P40121	348 aa		12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	CAV3	P56539	151 aa		12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	BPIFB3	P59826	476 aa		12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	SMIM21	Q3B7S5	101 aa		12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	ZDHHC22	Q8N966	263 aa		12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	SETD9	Q8NE22	299 aa		12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	OR51A4	Q8NGJ6	313 aa		12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	TRMT10A	Q8TBZ6	339 aa	Known RBP	12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	HAVCR2	Q8TDQ0	301 aa		12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	FGGY	Q96C11	551 aa		12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	ZNF48	Q96MX3	618 aa	Predicted RBP	12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	JMJD8	Q96S16	334 aa		12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	NKX1-2	Q9UD57	310 aa	Predicted RBP	12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	HSPE1-MOB4	S4R3N1	261 aa		12.75	□□□□□ -0.37
ECHDC2-223	ENST00000542552	IGHV3OR16-10	A0A075B7F0	116 aa		12.74	□□□□□ -0.37
ECHDC2-223	ENST00000542552	TRAV40	A0A0B4J280	105 aa		12.74	□□□□□ -0.37
ECHDC2-223	ENST00000542552	TOX4	O94842	621 aa		12.74	□□□□□ -0.37
ECHDC2-223	ENST00000542552	ZFPL1	O95159	310 aa		12.74	□□□□□ -0.37
ECHDC2-223	ENST00000542552	RPSA	P08865	295 aa	Known RBP	12.74	□□□□□ -0.37
ECHDC2-223	ENST00000542552	GNAO1	P09471	354 aa		12.74	□□□□□ -0.37

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