RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 PYCARD-AS1I3L0S3 204 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 SIRPB1O00241 398 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 GAPDHSO14556 408 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 HMGB3O15347 200 aaKnown RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 EDIL3O43854 480 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 PCDH7O60245 1069 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 YPEL1O60688 119 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 PQBP1O60828 265 aaKnown RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 DIRAS1O95057 198 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 GJB5O95377 273 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 GPR75O95800 540 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 GPANK1O95872 356 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 NUDT3O95989 172 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 TGFAP01135 160 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 H1F0P07305 194 aaKnown RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 FTH1P19P0C7X4 201 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 DANCRP0C864 163 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 MPC1LP0DKB6 136 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 OR12D1P0DN82 309 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 VSIG10L2P0DP72 767 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 PNMTP11086 282 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 ERGP11308 486 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 PTHLHP12272 177 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 VEGFAP15692 232 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 CR2P20023 1033 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 USF1P22415 310 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 PRPH2P23942 346 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 LMO1P25800 156 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 PSMB5P28074 263 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 S100A3P33764 101 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 SOAT1P35610 550 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 SREBF1P36956 1147 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 LPAR6P43657 344 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 XCR1P46094 333 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 RAB38P57729 211 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 PLP1P60201 277 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 LCN6P62502 163 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 RPS15P62841 145 aaKnown RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 HERV-K104P63124 156 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 HLA-DRB3P79483 266 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 MRPS34P82930 218 aaKnown RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 RPL24P83731 157 aaKnown RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 DHRS2Q13268 280 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 PMS2P11Q13670 270 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 ENDOGQ14249 297 aaKnown RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 PMCHL1Q16048 86 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 PCK2Q16822 640 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 LTC4SQ16873 150 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 CD300EQ496F6 205 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 SYT14P1Q58G82 188 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 GCSAMLQ5JQS6 135 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 FAM78BQ5VT40 261 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 DCAF12L2Q5VW00 463 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 TMEM42Q69YG0 159 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 FAAP20Q6NZ36 180 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 TRAT1Q6PIZ9 186 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 WDR82Q6UXN9 313 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 DPPA3Q6W0C5 159 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 C12orf54Q6X4T0 127 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 Q6ZRG5 221 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 C1orf210Q8IVY1 113 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 MSRB3Q8IXL7 192 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 CMTM1Q8IZ96 169 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 PTGR2Q8N8N7 351 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 BMPERQ8N8U9 685 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 ZDHHC22Q8N966 263 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 FER1L6-AS1Q8NA97 138 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 POC1AQ8NBT0 407 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 NPEPL1Q8NDH3 523 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 OR5A1Q8NGJ0 315 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 OR10X1Q8NGY0 326 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 OR4X1Q8NH49 305 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 VN1R17PQ8TDU5 208 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 PPP1R1CQ8WVI7 109 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 SPRYD4Q8WW59 207 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 DVL3Q92997 716 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 APH1AQ96BI3 265 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 ZMYND19Q96E35 227 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 RBMXL1Q96E39 390 aaKnown RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 THOC3Q96J01 351 aaKnown RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 LOXL4Q96JB6 756 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 OR10C1Q96KK4 312 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 SNX22Q96L94 193 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 ZNF582Q96NG8 517 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 ZFP3Q96NJ6 502 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 MS4A10Q96PG2 267 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 YPEL2Q96QA6 119 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 HIST1H2AAQ96QV6 131 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 SCRT1Q9BWW7 348 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 MAP1LC3BQ9GZQ8 125 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 EIF5A2Q9GZV4 153 aaKnown RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 GEMIN7Q9H840 131 aaKnown RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 RDH14Q9HBH5 336 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 OR2S2Q9NQN1 319 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 SLC7A10Q9NS82 523 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 MED29Q9NX70 200 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 SLC25A37Q9NYZ2 338 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 DNAJC27Q9NZQ0 273 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 KIAA1456Q9P272 454 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 C5AR2Q9P296 337 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms