RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 LYZL4Q96KX0 146 aa12.74□□□□□ -0.37
SPOCK3-226ENST00000541354 NICN1Q9BSH3 213 aa12.74□□□□□ -0.37
SPOCK3-226ENST00000541354 URM1Q9BTM9 101 aaKnown RBP12.74□□□□□ -0.37
SPOCK3-226ENST00000541354 TMEM59Q9BXS4 323 aa12.74□□□□□ -0.37
SPOCK3-226ENST00000541354 FN3KRPQ9HA64 309 aa12.74□□□□□ -0.37
SPOCK3-226ENST00000541354 NOP16Q9Y3C1 178 aaKnown RBP12.74□□□□□ -0.37
SPOCK3-226ENST00000541354 CRYABP02511 175 aaKnown RBP12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 PRKACBP22694 351 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 ANOS1P23352 680 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 OR3A4PP47883 348 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 HTR5AP47898 357 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 ARL6IP1Q15041 203 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 TMEM42Q69YG0 159 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 OR4K15Q8NH41 348 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 TERB2Q8NHR7 220 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 PHYHIPLQ96FC7 376 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 TM2D1Q9BX74 207 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 DNTTIP1Q9H147 329 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 GPR132Q9UNW8 380 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 AHCTF1Q8WYP5 2266 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 TNRC6AQ8NDV7 1962 aaKnown RBP12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 F5H5K5 113 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 HOXD4P09016 255 aaPredicted RBP12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 PPA1Q15181 289 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 CNN3Q15417 329 aaKnown RBP12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 SLC22A6Q4U2R8 563 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 ZNF774Q6NX45 483 aa12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 PEG10Q86TG7 708 aaKnown RBP12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 PNLDC1Q8NA58 520 aaKnown RBP12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 C1orf162Q8NEQ5 155 aaPredicted RBP12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 ZNF230Q9UIE0 474 aaPredicted RBP12.73□□□□□ -0.37
SPOCK3-226ENST00000541354 TRBV6-7A0A0A0MS04 114 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 KRBOX1C9JBD0 128 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 E9PLN8 166 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 SLC6A9P48067 706 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 IL13RA1P78552 427 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 ALKAL2Q6UX46 152 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 C17orf107Q6ZR85 190 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 LHFPL1Q86WI0 220 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 COMMD2Q86X83 199 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 SEMA6DQ8NFY4 1073 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 OR1K1Q8NGR3 316 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 OR1S1Q8NH92 325 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 SGK3Q96BR1 496 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 FAM71F1Q96KD3 344 aaPredicted RBP12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 COMMD9Q9P000 198 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 ZSCAN5BA6NJL1 495 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 SOCS1O15524 211 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 MPIG6BO95866 241 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 IFNA6P05013 189 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 SLC2A1P11166 492 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 NHLH1Q02575 133 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 OR8B8Q15620 311 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 ACOT7LQ6ZUV0 252 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 P4HA3Q7Z4N8 544 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 PDZD9Q8IXQ8 264 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 ST8SIA2Q92186 375 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 PIGTQ969N2 578 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 PFDN2Q9UHV9 154 aa12.72□□□□□ -0.37
SPOCK3-226ENST00000541354 RNF222A6NCQ9 220 aa12.71□□□□□ -0.37
SPOCK3-226ENST00000541354 BCL2L11O43521 198 aa12.71□□□□□ -0.37
SPOCK3-226ENST00000541354 MICBQ29980 383 aa12.71□□□□□ -0.37
SPOCK3-226ENST00000541354 RTL6Q6ICC9 239 aa12.71□□□□□ -0.37
SPOCK3-226ENST00000541354 BCL2L2Q92843 193 aaPredicted RBP12.71□□□□□ -0.37
SPOCK3-226ENST00000541354 CXorf58Q96LI9 332 aa12.71□□□□□ -0.37
SPOCK3-226ENST00000541354 SCGB3A2Q96PL1 93 aa12.71□□□□□ -0.37
SPOCK3-226ENST00000541354 RASL12Q9NYN1 266 aa12.71□□□□□ -0.37
SPOCK3-226ENST00000541354 SESN1Q9Y6P5 492 aa12.71□□□□□ -0.37
SPOCK3-226ENST00000541354 HCKP08631 526 aa12.71□□□□□ -0.38
SPOCK3-226ENST00000541354 PTGFRP43088 359 aa12.71□□□□□ -0.38
SPOCK3-226ENST00000541354 TGFBR3Q03167 851 aa12.71□□□□□ -0.38
SPOCK3-226ENST00000541354 KISS1Q15726 138 aa12.71□□□□□ -0.38
SPOCK3-226ENST00000541354 TMEM128Q5BJH2 165 aa12.71□□□□□ -0.38
SPOCK3-226ENST00000541354 PABPC1L2AQ5JQF8 200 aa12.71□□□□□ -0.38
SPOCK3-226ENST00000541354 NUFIP2Q7Z417 695 aaKnown RBP12.71□□□□□ -0.38
SPOCK3-226ENST00000541354 ST8SIA4Q92187 359 aa12.71□□□□□ -0.38
SPOCK3-226ENST00000541354 ZNF775Q96BV0 537 aaPredicted RBP12.71□□□□□ -0.38
SPOCK3-226ENST00000541354 REEP6Q96HR9 211 aa12.71□□□□□ -0.38
SPOCK3-226ENST00000541354 NMES1Q9C002 83 aa12.71□□□□□ -0.38
SPOCK3-226ENST00000541354 WASF3Q9UPY6 502 aa12.71□□□□□ -0.38
SPOCK3-226ENST00000541354 MSRB2Q9Y3D2 182 aa12.71□□□□□ -0.38
SPOCK3-226ENST00000541354 RAD51DO75771 328 aa12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 PLP2Q04941 152 aa12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 MOB3CQ70IA8 216 aa12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 FAM214BQ7L5A3 538 aa12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 ADAD2Q8NCV1 583 aaKnown RBP12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 COQ8AQ8NI60 647 aa12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 PPP1R1CQ8WVI7 109 aa12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 DMRTA2Q96SC8 542 aa12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 hCG_38984A0A1B0GV85 526 aa12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 KLK10O43240 276 aa12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 CSN2P05814 226 aa12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 TUBG1P23258 451 aa12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 CYCSP99999 105 aaKnown RBP12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 RSPO4Q2I0M5 234 aaPredicted RBP12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 KRTCAP3Q53RY4 240 aa12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 BVESQ8NE79 360 aa12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 APOBEC3DQ96AK3 386 aaPredicted RBP12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 SPACA5Q96QH8 159 aa12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 TUBG2Q9NRH3 451 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms