RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ARHGAP21Q5T5U3 1957 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 FAM230AA0A1W2PPH8 454 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 ZNF727A8MUV8 499 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 OR5AC1P0C628 307 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 THBS4P35443 961 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 DCAF7P61962 342 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 ACER2Q5QJU3 275 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 PLXDC2Q6UX71 529 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 SULF2Q8IWU5 870 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 OR14K1Q8NGZ2 314 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 SLAMF9Q96A28 289 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 UCN2Q96RP3 112 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 PRRX2Q99811 253 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 MTIF3Q9H2K0 278 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 SMCO4Q9NRQ5 59 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 C14orf166Q9Y224 244 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 PIGLQ9Y2B2 252 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 MMP24Q9Y5R2 645 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 EXPH5Q8NEV8 1989 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 IGHV1OR21-1A0A087WYE8 117 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 CDRT15L2A8MXV6 281 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 C1orf196B1AJZ1 125 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 C2CD4DB7Z1M9 353 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 TNFSF12O43508 249 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 IGHG1P01857 330 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 PRH1P02810 166 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 JMJD7P0C870 316 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 CD38P28907 300 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 PIGPP57054 158 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 CCL20P78556 96 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 C17orf67Q0P5P2 114 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 ECH1Q13011 328 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 CLINT1Q14677 625 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 OR9K2Q8NGE7 335 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 URM1Q9BTM9 101 aaKnown RBP9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 METTL7AQ9H8H3 244 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 PLEKHJ1Q9NW61 149 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 MIOXQ9UGB7 285 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 PUS1Q9Y606 427 aaKnown RBP eCLIP9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 FREM1Q5H8C1 2179 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 ESPL1Q14674 2120 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 A0A1B0GX78 115 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 C5orf52A6NGY3 159 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 LILRA5A6NI73 299 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 NDUFS6O75380 124 aaKnown RBP9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 DEDDO75618 318 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 LYL1P12980 280 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 TBPP20226 339 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 ZNF41P51814 821 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 GUK1Q16774 197 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 PLPPR5Q32ZL2 321 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 MEX3BQ6ZN04 569 aaKnown RBP9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 TMEM182Q6ZP80 229 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 EDARADDQ8WWZ3 215 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 ZNF385AQ96PM9 386 aaKnown RBP9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 RGCCQ9H4X1 137 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 ZNF160Q9HCG1 818 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 ALKBH4Q9NXW9 302 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 URGCP-MRPS24S4R325 110 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 IGHV1OR15-9A0A0B4J2B8 117 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 CLN5O75503 358 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 YIF1AO95070 293 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 OR8U8P0C7N1 319 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 LTBRP36941 435 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 DVL1P1P54792 670 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 ZP4Q12836 540 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 RSPO1Q2MKA7 263 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 PIGYQ3MUY2 71 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 FBXO46Q6PJ61 603 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 ANAPC10Q9UM13 185 aa9.06□□□□□ -0.96
CDC42SE1-207ENST00000540998 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 ZNF850A8MQ14 1090 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 UMAD1C9J7I0 102 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 CST4P01036 141 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 ZNF43P17038 809 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 APOBEC1P41238 236 aaKnown RBP9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 CAMLGP49069 296 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 ZNF343Q6P1L6 599 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 MYPOPQ86VE0 399 aaPredicted RBP9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 SAT2Q96F10 170 aaPredicted RBP9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 SCRT1Q9BWW7 348 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 MAGT1Q9H0U3 335 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 AHCTF1Q8WYP5 2266 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 ONECUT2O95948 504 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 HEXAP06865 529 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 OR5H8P0DN80 308 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 GSK3AP49840 483 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 CCR5P51681 352 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 PDZD11Q5EBL8 140 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 THEM4Q5T1C6 240 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 FAM213BQ8TBF2 198 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 MRPL38Q96DV4 380 aaKnown RBP9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 RBM24Q9BX46 236 aaKnown RBP9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 AK3Q9UIJ7 227 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 PADI1Q9ULC6 663 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 TIMM10BQ9Y5J6 103 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 PI4KAP42356 2102 aa9.05□□□□□ -0.96
CDC42SE1-207ENST00000540998 CCDC187A0A096LP49 1063 aa9.04□□□□□ -0.96
CDC42SE1-207ENST00000540998 FIGNL2A6NMB9 653 aa9.04□□□□□ -0.96
CDC42SE1-207ENST00000540998 CEACAM18A8MTB9 384 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms