RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ALKBH2Q6NS38 261 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 STEAP1BQ6NZ63 245 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 FBXW12Q6X9E4 464 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 SLC25A26Q70HW3 274 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 C6orf201Q7Z4U5 140 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 WDR86Q86TI4 376 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 AKAP14Q86UN6 197 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 CDH24Q86UP0 819 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 BEST4Q8NFU0 473 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 OR56B1Q8NGI3 324 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 OR1J1Q8NGS3 322 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 OR5P3Q8WZ94 311 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 DYRK2Q92630 601 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 SNAPC3Q92966 411 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 PPP1R14BQ96C90 147 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 ST6GAL2Q96JF0 529 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 NUDT16L1Q9BRJ7 211 aaKnown RBP10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 SFXN3Q9BWM7 321 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 PECRQ9BY49 303 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 METTL9Q9H1A3 318 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 TP63Q9H3D4 680 aaPredicted RBP10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 ETAA1Q9NY74 926 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 IL36RNQ9UBH0 155 aa10.51□□□□□ -0.73
AP003559.1-201ENST00000540906 IGHV2OR16-5A0A0B4J2B6 119 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 HMX3A6NHT5 357 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 PRRG2O14669 202 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 ARPC1BO15143 372 aaKnown RBP10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 AKAIN1P0CW23 69 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 PSMB1P20618 241 aaKnown RBP10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 RBMXP38159 391 aaKnown RBP10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 TAF9Q16594 264 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 CEACAM21Q3KPI0 293 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 BRICD5Q6PL45 260 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 FBXL14Q8N1E6 418 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 C17orf78Q8N4C9 275 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 ZNF611Q8N823 705 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 TMEM229BQ8NBD8 167 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 RELL2Q8NC24 303 aaPredicted RBP10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 CSNK2A3Q8NEV1 391 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 OR51S1Q8NGJ8 323 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 OR6F1Q8NGZ6 308 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 MAFIPQ8WZ33 124 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 ST8SIA4Q92187 359 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 SLAMF9Q96A28 289 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 ZNF488Q96MN9 340 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 S100A13Q99584 98 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 HDHD3Q9BSH5 251 aaPredicted RBP10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 URM1Q9BTM9 101 aaKnown RBP10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 GHITMQ9H3K2 345 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 FZR1Q9UM11 496 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 PKD1L2Q7Z442 2459 aa10.5□□□□□ -0.73
AP003559.1-201ENST00000540906 ATRXP46100 2492 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 NAP1L6A6NFF2 107 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 A8MXE2 369 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 EEF1E1-BLOC1S5C9J1V9 151 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 H0YL77 283 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 GEMIN2O14893 280 aaKnown RBP10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 HPXP02790 462 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 CD74P04233 296 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 BCL3P20749 454 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 HOXC12P31275 282 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 RAD52P43351 418 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 HAAOP46952 286 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 ZNF83P51522 516 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 PSG7Q13046 419 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 SEZ6L2Q6UXD5 910 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 PXT1Q8NFP0 134 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 OR5L1Q8NGL2 311 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 OR51F2Q8NH61 342 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 MARS2Q96GW9 593 aaKnown RBP10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 SLC6A7Q99884 636 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 ZNF230Q9UIE0 474 aaPredicted RBP10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 ANAPC10Q9UM13 185 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 SMG1Q96Q15 3661 aaKnown RBP10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 IGHV3-64DA0A0J9YX35 117 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 C7orf66A4D0T2 115 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 PYCARD-AS1I3L0S3 204 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 CCNKO75909 580 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 NDUFB6O95139 128 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 CSN2P05814 226 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 GSTP1P09211 210 aaKnown RBP10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 ANXA7P20073 488 aaKnown RBP10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 NKX2-5P52952 324 aaPredicted RBP10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 SNU13P55769 128 aaKnown RBP10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 TAS2R19P59542 299 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 GNG2P59768 71 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 ACTBP60709 375 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 ACTG1P63261 375 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 SSBP1Q04837 148 aaKnown RBP10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 NKPD1Q17RQ9 610 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 EIF2S3LQ2VIR3 472 aaKnown RBP10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 NKAPLQ5M9Q1 402 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 ATAD3CQ5T2N8 411 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 ZNF782Q6ZMW2 699 aaPredicted RBP10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 STEAP2Q8NFT2 490 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 KLF14Q8TD94 323 aaPredicted RBP10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 GIMAP1Q8WWP7 306 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 FBXW5Q969U6 566 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 MRGPRFQ96AM1 343 aa10.49□□□□□ -0.73
AP003559.1-201ENST00000540906 FYTTD1Q96QD9 318 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms