RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 RNF133Q8WVZ7 376 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 OR5P3Q8WZ94 311 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 H1FXQ92522 213 aaKnown RBP5.9□□□□□ -1.46
YBX3-209ENST00000540747 SGCDQ92629 289 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 R3HDM4Q96D70 268 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 SDSLQ96GA7 329 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 MED30Q96HR3 178 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 REEP6Q96HR9 211 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 OR4F4Q96R69 305 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 CITED2Q99967 270 aaPredicted RBP5.9□□□□□ -1.46
YBX3-209ENST00000540747 CDCA4Q9BXL8 241 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 MAGIXQ9H6Y5 334 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 ELL3Q9HB65 397 aaPredicted RBP5.9□□□□□ -1.46
YBX3-209ENST00000540747 PLGRKTQ9HBL7 147 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 KRCC1Q9NPI7 259 aaPredicted RBP5.9□□□□□ -1.46
YBX3-209ENST00000540747 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.9□□□□□ -1.46
YBX3-209ENST00000540747 C19orf12Q9NSK7 152 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 SNTG1Q9NSN8 517 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 ZNF391Q9UJN7 358 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 BLOC1S6Q9UL45 172 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 FAM32AQ9Y421 112 aaKnown RBP5.9□□□□□ -1.46
YBX3-209ENST00000540747 SNX5Q9Y5X3 404 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 CDH10Q9Y6N8 788 aa5.9□□□□□ -1.46
YBX3-209ENST00000540747 OR2AT4A6NND4 320 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 ODF3BA8MYP8 253 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 AKR7A2O43488 359 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 ANGPTL7O43827 346 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 GNAO1P09471 354 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 SPARCP09486 303 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 VSIG8P0DPA2 414 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 PSG2P11465 335 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 IGLL1P15814 213 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 JUNBP17275 347 aaPredicted RBP5.89□□□□□ -1.47
YBX3-209ENST00000540747 CFL1P23528 166 aaKnown RBP5.89□□□□□ -1.47
YBX3-209ENST00000540747 OPRL1P41146 370 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 CX3CR1P49238 355 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 SLC25A1P53007 311 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 DLX6P56179 175 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 KRTAP10-11P60412 298 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 GRB2P62993 217 aaKnown RBP5.89□□□□□ -1.47
YBX3-209ENST00000540747 CD83Q01151 205 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 IL5RAQ01344 420 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 EGFEM1PQ0D2K5 195 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 ZNF770Q6IQ21 691 aaPredicted RBP5.89□□□□□ -1.47
YBX3-209ENST00000540747 ZNF773Q6PK81 442 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 Q6ZS46 218 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 MKXQ8IYA7 352 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 DTX3Q8N9I9 347 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 ZNRF1Q8ND25 227 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 PROKR2Q8NFJ6 384 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 OR52H1Q8NGJ2 320 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 OR51L1Q8NGJ5 315 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 RPL3LQ92901 407 aaKnown RBP5.89□□□□□ -1.47
YBX3-209ENST00000540747 PYURFQ96I23 114 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 LYZL4Q96KX0 146 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 AMELYQ99218 206 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 MICU1Q9BPX6 476 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 RTL8AQ9BWD3 113 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 PAPOLGQ9BWT3 736 aaKnown RBP5.89□□□□□ -1.47
YBX3-209ENST00000540747 EGLN3Q9H6Z9 239 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 ABCB9Q9NP78 766 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 FAM118AQ9NWS6 357 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 ETAA1Q9NY74 926 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 IL20Q9NYY1 176 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 USE1Q9NZ43 259 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 NLKQ9UBE8 527 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 SAMD4AQ9UPU9 718 aaKnown RBP5.89□□□□□ -1.47
YBX3-209ENST00000540747 TCF19Q9Y242 345 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 LRP12Q9Y561 859 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 MPC1Q9Y5U8 109 aa5.89□□□□□ -1.47
YBX3-209ENST00000540747 A0A1W2PQ09 198 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 WI2-2373I1.2A0A1W2PRP0 233 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 ZNF593O00488 134 aaPredicted RBP5.88□□□□□ -1.47
YBX3-209ENST00000540747 TBX1O43435 398 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 MTRF1O75570 445 aaKnown RBP5.88□□□□□ -1.47
YBX3-209ENST00000540747 RHBDL1O75783 438 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 GADD45GO95257 159 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 CLIC3O95833 236 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 MPIG6BO95866 241 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 NDUFB7P17568 137 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 SPI1P17947 270 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 FMO3P31513 532 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 DYNLT3P51808 116 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 HMGA2P52926 109 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 ZNF121P58317 390 aaPredicted RBP5.88□□□□□ -1.47
YBX3-209ENST00000540747 SMIM11AP58511 58 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 GMFBP60983 142 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 PRDX4Q13162 271 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 IL18R1Q13478 541 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 CRMP1Q14194 572 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 CNN3Q15417 329 aaKnown RBP5.88□□□□□ -1.47
YBX3-209ENST00000540747 NEDD8Q15843 81 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 TIGD6Q17RP2 521 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 TCTEX1D4Q5JR98 221 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 C6orf141Q5SZD1 244 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 ZBTB37Q5TC79 503 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 GPR107Q5VW38 600 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 RPL13AP3Q6NVV1 102 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 FAM57BQ71RH2 274 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 LHFPL4Q7Z7J7 247 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms