RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 OR2F2O95006 317 aa9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 SFT2D2O95562 160 aa9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 SERPINA5P05154 406 aa9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 MEOX1P50221 254 aa9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 PRSS12P56730 875 aa9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 OR2F1Q13607 317 aa9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 ZNF345Q14585 488 aa9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 ZNF660Q6AZW8 331 aaPredicted RBP9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 RPUSD3Q6P087 351 aaKnown RBP9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 KCTD9Q7L273 389 aa9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 KCNRGQ8N5I3 272 aa9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 FNDC9Q8TBE3 224 aa9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 MAFIPQ8WZ33 124 aa9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 CALHM2Q9HA72 323 aa9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 EHFQ9NZC4 300 aa9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 IL36GQ9NZH8 169 aa9.9□□□□□ -0.82
SLC28A1-204ENST00000538177 KLRC4-KLRK1H3BQV0 150 aa9.9□□□□□ -0.83
SLC28A1-204ENST00000538177 SDCBPO00560 298 aaPredicted RBP9.9□□□□□ -0.83
SLC28A1-204ENST00000538177 COX5BP10606 129 aa9.9□□□□□ -0.83
SLC28A1-204ENST00000538177 ATP1B3P54709 279 aa9.9□□□□□ -0.83
SLC28A1-204ENST00000538177 SURF2Q15527 256 aaPredicted RBP9.9□□□□□ -0.83
SLC28A1-204ENST00000538177 TAF9Q16594 264 aa9.9□□□□□ -0.83
SLC28A1-204ENST00000538177 CHRFAM7AQ494W8 412 aa9.9□□□□□ -0.83
SLC28A1-204ENST00000538177 ZSCAN4Q8NAM6 433 aaPredicted RBP9.9□□□□□ -0.83
SLC28A1-204ENST00000538177 ZFP62Q8NB50 900 aaPredicted RBP9.9□□□□□ -0.83
SLC28A1-204ENST00000538177 MRPS24Q96EL2 167 aaKnown RBP9.9□□□□□ -0.83
SLC28A1-204ENST00000538177 SLX1AQ9BQ83 275 aa9.9□□□□□ -0.83
SLC28A1-204ENST00000538177 ACKR4Q9NPB9 350 aa9.9□□□□□ -0.83
SLC28A1-204ENST00000538177 MED9Q9NWA0 146 aa9.9□□□□□ -0.83
SLC28A1-204ENST00000538177 EDARQ9UNE0 448 aa9.9□□□□□ -0.83
SLC28A1-204ENST00000538177 SLC7A11Q9UPY5 501 aa9.9□□□□□ -0.83
SLC28A1-204ENST00000538177 KMT2EQ8IZD2 1858 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 FREM1Q5H8C1 2179 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 IGKV1D-8A0A087WSZ0 117 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 IGKV1-12A0A0C4DH73 117 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 FAM25EA8MYX2 175 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 IGKV1D-12P01611 117 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 NMBP08949 121 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 CHATP28329 748 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 AP2S1P53680 142 aaPredicted RBP9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 PPIAP62937 165 aaKnown RBP9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 SUPT4H1P63272 117 aaKnown RBP9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 PDZK1IP1Q13113 114 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 RNPS1Q15287 305 aaKnown RBP9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 TOR2AQ5JU69 321 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 NKAPLQ5M9Q1 402 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 ALKAL2Q6UX46 152 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 CLEC18BQ6UXF7 455 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 MOB3CQ70IA8 216 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 IL22RA1Q8N6P7 574 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 WBP1Q96G27 269 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 PRRG4Q9BZD6 226 aa9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 ZNF701Q9NV72 531 aaPredicted RBP9.89□□□□□ -0.83
SLC28A1-204ENST00000538177 MSTNO14793 375 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 ACTL6AO96019 429 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 PDGFAP04085 211 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 RPS2P15880 293 aaKnown RBP9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 DTYMKP23919 212 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 SERPINF1P36955 418 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 FOXG1P55316 489 aaPredicted RBP9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 CYCSP99999 105 aaKnown RBP9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 SLC10A1Q14973 349 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 TRIP6Q15654 476 aaKnown RBP9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 AANATQ16613 207 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 RGS7BPQ6MZT1 257 aaPredicted RBP9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 ACOT7LQ6ZUV0 252 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 PIGCQ92535 297 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 APH1AQ96BI3 265 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 FAAP24Q9BTP7 215 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 REPIN1Q9BWE0 567 aaKnown RBP9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 NMES1Q9C002 83 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 RAB18Q9NP72 206 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 DNAJC13O75165 2243 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 ZNF407Q9C0G0 2248 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 A0A096LPE4 126 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 A0A1W2PPZ6 126 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 RNF222A6NCQ9 220 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 EEF1E1-BLOC1S5C9J1V9 151 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 SHOXO15266 292 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 PLATP00750 562 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 CRHP06850 196 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 CD46P15529 392 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 PI3P19957 117 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 GLRA1P23415 457 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 ECI1P42126 302 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 UBA52P62987 128 aaKnown RBP9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 BAMBIQ13145 260 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 LRRC37A5PQ49AS3 106 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 PLCXD3Q63HM9 321 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 GLRX5Q86SX6 157 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 OSR2Q8N2R0 312 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 OR5M9Q8NGP3 310 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 COQ8AQ8NI60 647 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 THAP6Q8TBB0 222 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 POM121Q96HA1 1249 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 HDHD3Q9BSH5 251 aaPredicted RBP9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 PCDHB16Q9NRJ7 776 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 DECR2Q9NUI1 292 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 RDH8Q9NYR8 311 aa9.88□□□□□ -0.83
SLC28A1-204ENST00000538177 AK3Q9UIJ7 227 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms