RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 HTR2CP28335 458 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 SOX6P35712 828 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 SERPINB10P48595 397 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 RORCP51449 518 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 TMEM33P57088 247 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 DSCR9P59020 149 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 VBP1P61758 197 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 CCL8P80075 99 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 FAM90A1Q86YD7 464 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 JAGN1Q8N5M9 183 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 TRMT10AQ8TBZ6 339 aaKnown RBP13.74□□□□□ -0.21
VAMP1-205ENST00000535927 ITLN1Q8WWA0 313 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 ACOT12Q8WYK0 555 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 AQP3Q92482 292 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 SLC25A46Q96AG3 418 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 DCSTAMPQ9H295 470 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 SEBOXQ9HB31 216 aaPredicted RBP13.74□□□□□ -0.21
VAMP1-205ENST00000535927 GCM1Q9NP62 436 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 RNF7Q9UBF6 113 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 FBLN5Q9UBX5 448 aa13.74□□□□□ -0.21
VAMP1-205ENST00000535927 AK6Q9Y3D8 172 aaKnown RBP13.74□□□□□ -0.21
VAMP1-205ENST00000535927 DYSFO75923 2080 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 CSMD1Q96PZ7 3565 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 IGHV1-69-2A0A0G2JMI3 117 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 GRPP07492 148 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 CPT2P23786 658 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 RPS19P39019 145 aaKnown RBP13.73□□□□□ -0.21
VAMP1-205ENST00000535927 ZP1P60852 638 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 NCS1P62166 190 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 LSM3P62310 102 aaKnown RBP13.73□□□□□ -0.21
VAMP1-205ENST00000535927 HFEQ30201 348 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 ELP2Q6IA86 826 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 FAM166AQ6J272 317 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 HAGHLQ6PII5 290 aaPredicted RBP13.73□□□□□ -0.21
VAMP1-205ENST00000535927 CDH24Q86UP0 819 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 Q8NFD4 153 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 OR51F2Q8NH61 342 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 TBC1D15Q8TC07 691 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 AP3S1Q92572 193 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 PTX4Q96A99 478 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 C12orf43Q96C57 262 aaKnown RBP13.73□□□□□ -0.21
VAMP1-205ENST00000535927 NAA50Q9GZZ1 169 aaKnown RBP13.73□□□□□ -0.21
VAMP1-205ENST00000535927 METTL9Q9H1A3 318 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 PLGRKTQ9HBL7 147 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 ABRACLQ9P1F3 81 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 STEAP1Q9UHE8 339 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 NPTNQ9Y639 398 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 ARID1AO14497 2285 aa13.73□□□□□ -0.21
VAMP1-205ENST00000535927 OTOGQ6ZRI0 2925 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 IGKV1-27A0A075B6S5 117 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 A6NLC8 198 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 TRAPPC2LH3BP13 241 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 LHBP01229 141 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 TMEM225BP0DP42 221 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 CALCBP10092 127 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 KCNJ8Q15842 424 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 RAB11BQ15907 218 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 SFXN4Q6P4A7 337 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 FIP1L1Q6UN15 594 aaKnown RBP13.72□□□□□ -0.21
VAMP1-205ENST00000535927 PEG10Q86TG7 708 aaKnown RBP13.72□□□□□ -0.21
VAMP1-205ENST00000535927 ANGPTL5Q86XS5 388 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 C11orf53Q8IXP5 236 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 NPRL2Q8WTW4 380 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 GTF3AQ92664 365 aaKnown RBP13.72□□□□□ -0.21
VAMP1-205ENST00000535927 ORAI1Q96D31 301 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 CMTM3Q96MX0 182 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 FGF23Q9GZV9 251 aaPredicted RBP13.72□□□□□ -0.21
VAMP1-205ENST00000535927 CNTD2Q9H8S5 307 aa13.72□□□□□ -0.21
VAMP1-205ENST00000535927 USF3Q68DE3 2245 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 TANC2Q9HCD6 1990 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 SHISA3A0PJX4 238 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 CDIPTO14735 213 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 KDM4BO94953 1096 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 PGA5P0DJD9 388 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 ZNF182P17025 639 aaPredicted RBP13.71□□□□□ -0.21
VAMP1-205ENST00000535927 WDR82Q6UXN9 313 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 SLC25A26Q70HW3 274 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 OR2W3Q7Z3T1 314 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 WDR86Q86TI4 376 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 MOGAT3Q86VF5 341 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 CALHM1Q8IU99 346 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 POC1AQ8NBT0 407 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 KCNG3Q8TAE7 436 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 TNFAIP8L1Q8WVP5 186 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 CEP19Q96LK0 163 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 CST11Q9H112 138 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 PPP1R3EQ9H7J1 279 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 CHODLQ9H9P2 273 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 C1orf123Q9NWV4 160 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 CCDC59Q9P031 241 aaKnown RBP13.71□□□□□ -0.21
VAMP1-205ENST00000535927 MRPS28Q9Y2Q9 187 aaKnown RBP13.71□□□□□ -0.21
VAMP1-205ENST00000535927 A3GALT2U3KPV4 340 aa13.71□□□□□ -0.21
VAMP1-205ENST00000535927 A0A0G2JK05 382 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 SRRM5B3KS81 715 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 NDUFS8O00217 210 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 NDUFA2O43678 99 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 HPXP02790 462 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 CSTBP04080 98 aaKnown RBP13.7□□□□□ -0.22
VAMP1-205ENST00000535927 DAOP14920 347 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 MUC1P15941 1255 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms