RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CIRBPQ14011 172 aaKnown RBP-0.4□□□□□ -2.47
COPB1-212ENST00000534771 ZBTB6Q15916 424 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 NNATQ16517 81 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 VPS26BQ4G0F5 336 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 NADK2Q4G0N4 442 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 RIPPLY2Q5TAB7 128 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 KDM4DQ6B0I6 523 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 ELP2Q6IA86 826 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 CLEC18BQ6UXF7 455 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 CMC1Q7Z7K0 106 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 UNC93AQ86WB7 457 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 OR10P1Q8NGE3 313 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 OR4A5Q8NH83 315 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 NUBPLQ8TB37 319 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 CCDC110Q8TBZ0 833 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 TNFRSF14Q92956 283 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 TMIGD2Q96BF3 282 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 ECHDC3Q96DC8 303 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 TMEM43Q9BTV4 400 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 HEBP1Q9NRV9 189 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 SDAD1Q9NVU7 687 aaKnown RBP eCLIP-0.4□□□□□ -2.47
COPB1-212ENST00000534771 MED9Q9NWA0 146 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 NDUFB11Q9NX14 153 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 PLAC8Q9NZF1 115 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 CCDC59Q9P031 241 aaKnown RBP-0.4□□□□□ -2.47
COPB1-212ENST00000534771 VAX2Q9UIW0 290 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 ZNF780BQ9Y6R6 833 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 ENPP4Q9Y6X5 453 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 ZFC3H1O60293 1989 aaKnown RBP-0.4□□□□□ -2.47
COPB1-212ENST00000534771 CACNA1SQ13698 1873 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 ZNF608Q9ULD9 1512 aaPredicted RBP-0.4□□□□□ -2.47
COPB1-212ENST00000534771 COL18A1P39060 1754 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 NPHP4O75161 1426 aaPredicted RBP-0.4□□□□□ -2.47
COPB1-212ENST00000534771 LCTP09848 1927 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 DOPEY1Q5JWR5 2465 aa-0.41□□□□□ -2.47
COPB1-212ENST00000534771 TNIKQ9UKE5 1360 aa-0.41□□□□□ -2.47
COPB1-212ENST00000534771 IGHV6-1A0A0B4J1U7 121 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 A0A1B0GWJ7 208 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 K7EQM0 130 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 PRMT5O14744 637 aaPredicted RBP-0.41□□□□□ -2.48
COPB1-212ENST00000534771 AIM2O14862 343 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 RAB29O14966 203 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 GYG2O15488 501 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 PRPSAP2O60256 369 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 SNNO75324 88 aaPredicted RBP-0.41□□□□□ -2.48
COPB1-212ENST00000534771 PDYNP01213 254 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 OR4Q2P0C623 313 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 OR12D1P0DN82 309 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 PSKH1P11801 424 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 GTF2F2P13984 249 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 CD36P16671 472 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 HLA-GP17693 338 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 CSNK2A2P19784 350 aaPredicted RBP-0.41□□□□□ -2.48
COPB1-212ENST00000534771 ALOX5APP20292 161 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 HTR2CP28335 458 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 CRYBB2P43320 205 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 PPICP45877 212 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 RAB7AP51149 207 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 RAB11AP62491 216 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 INCA1Q0VD86 236 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 BST1Q10588 318 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 SURF2Q15527 256 aaPredicted RBP-0.41□□□□□ -2.48
COPB1-212ENST00000534771 HNRNPA1L2Q32P51 320 aaKnown RBP-0.41□□□□□ -2.48
COPB1-212ENST00000534771 FBXL19-AS1Q494R0 122 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 C6orf226Q5I0X4 101 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 Q6ZSR3 168 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 C2orf91Q6ZV80 131 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 NIPA1Q7RTP0 329 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 CBLN2Q8IUK8 224 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 OR4X2Q8NGF9 303 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 OR6K6Q8NGW6 343 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 MGARPQ8TDB4 240 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 CLDN23Q96B33 292 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 MRPS24Q96EL2 167 aaKnown RBP-0.41□□□□□ -2.48
COPB1-212ENST00000534771 NAPGQ99747 312 aaPredicted RBP-0.41□□□□□ -2.48
COPB1-212ENST00000534771 SLC29A1Q99808 456 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 SLC39A3Q9BRY0 314 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 OR51M1Q9H341 326 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 PXMP2Q9NR77 195 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 PRO2289Q9P1D8 64 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 TAC3Q9UHF0 121 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 CACNA1BQ00975 2339 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 PLCH2O75038 1416 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 TTC28Q96AY4 2481 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 RYR3Q15413 4870 aa-0.41□□□□□ -2.48
COPB1-212ENST00000534771 USP42Q9H9J4 1324 aaKnown RBP-0.41□□□□□ -2.48
COPB1-212ENST00000534771 SETD1AO15047 1707 aaKnown RBP-0.41□□□□□ -2.48
COPB1-212ENST00000534771 ATG2BQ96BY7 2078 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 ATAD5Q96QE3 1844 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 ZNF99A8MXY4 864 aaPredicted RBP-0.42□□□□□ -2.48
COPB1-212ENST00000534771 F8W036 122 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 M0R3G1 203 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 NME4O00746 187 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 SCAMP2O15127 329 aaKnown RBP-0.42□□□□□ -2.48
COPB1-212ENST00000534771 PLA2G10O15496 165 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 SCN2BO60939 215 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 LSM8O95777 96 aaKnown RBP-0.42□□□□□ -2.48
COPB1-212ENST00000534771 SERPINA3P01011 423 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 NPPAP01160 153 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 PTHP01270 115 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms