RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 OR2G6Q5TZ20 316 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 RUSC1-AS1Q66K80 236 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 C16orf87Q6PH81 154 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 WDR82Q6UXN9 313 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 Q6YL49 198 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 KCTD8Q6ZWB6 473 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 ZNF367Q7RTV3 350 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 ZNF679Q8IYX0 411 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 PNLDC1Q8NA58 520 aaKnown RBP9.35□□□□□ -0.91
CLCF1-202ENST00000533438 CSNK2A3Q8NEV1 391 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 HAVCR2Q8TDQ0 301 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 LRRC29Q8WV35 223 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 TAF15Q92804 592 aaKnown RBP eCLIP9.35□□□□□ -0.91
CLCF1-202ENST00000533438 ITPKCQ96DU7 683 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 C4orf36Q96KX1 117 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 MROQ9BYG7 248 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 OR10A2Q9H208 303 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 RGCCQ9H4X1 137 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 UNKLQ9H9P5 680 aaKnown RBP9.35□□□□□ -0.91
CLCF1-202ENST00000533438 VCX3AQ9NNX9 186 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 MRM2Q9UI43 246 aaKnown RBP9.35□□□□□ -0.91
CLCF1-202ENST00000533438 RHBDD3Q9Y3P4 386 aa9.35□□□□□ -0.91
CLCF1-202ENST00000533438 IGHV3OR15-7A0A075B7D8 119 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 A0A1B0GW55 424 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 POM121CA8CG34 1229 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 SRRM5B3KS81 715 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 ECDO95905 644 aaPredicted RBP9.34□□□□□ -0.91
CLCF1-202ENST00000533438 TFAP2AP05549 437 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 KRT8P05787 483 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 DUX4L2P0CJ85 424 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 DUX4L3P0CJ86 424 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 DUX4L4P0CJ87 422 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 DUX4L5P0CJ88 424 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 DUX4L6P0CJ89 424 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 DUX4L7P0CJ90 424 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 ACKR3P25106 362 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 DCTDP32321 178 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 OR12D2P58182 307 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 BDH1Q02338 343 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 ACSM1Q08AH1 577 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 MRPL28Q13084 256 aaKnown RBP9.34□□□□□ -0.91
CLCF1-202ENST00000533438 SPHARQ15513 63 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 MICBQ29980 383 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 GFOD2Q3B7J2 385 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 TP53I3Q53FA7 332 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 PDLIM3Q53GG5 364 aaPredicted RBP9.34□□□□□ -0.91
CLCF1-202ENST00000533438 SYT6Q5T7P8 510 aaPredicted RBP9.34□□□□□ -0.91
CLCF1-202ENST00000533438 DUX4L9Q6RFH8 374 aaPredicted RBP9.34□□□□□ -0.91
CLCF1-202ENST00000533438 BTN2A1Q7KYR7 527 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 KRT77Q7Z794 578 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 FGFRL1Q8N441 504 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 MUL1Q969V5 352 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 PELI1Q96FA3 418 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 PGAM5Q96HS1 289 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 LYZL4Q96KX0 146 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 OR5M11Q96RB7 305 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 PAPOLGQ9BWT3 736 aaKnown RBP9.34□□□□□ -0.91
CLCF1-202ENST00000533438 TTTY10Q9BZA0 68 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 NIPAL2Q9H841 368 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 ISG20L2Q9H9L3 353 aaKnown RBP9.34□□□□□ -0.91
CLCF1-202ENST00000533438 ISYNA1Q9NPH2 558 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 NOX4Q9NPH5 578 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 BRD7Q9NPI1 651 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 BABAM2Q9NXR7 383 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 DUX4Q9UBX2 424 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 MPC1Q9Y5U8 109 aa9.34□□□□□ -0.91
CLCF1-202ENST00000533438 J3QLW9 94 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 PSMD9O00233 223 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 CDIPTO14735 213 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 MAGEB4O15481 346 aaPredicted RBP9.33□□□□□ -0.92
CLCF1-202ENST00000533438 CST4P01036 141 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 ZNF19P17023 458 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 AMY2BP19961 511 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 MDKP21741 143 aaPredicted RBP9.33□□□□□ -0.92
CLCF1-202ENST00000533438 GNALP38405 381 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 ALDH3B2P48448 385 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 RIDAP52758 137 aaKnown RBP9.33□□□□□ -0.92
CLCF1-202ENST00000533438 PSMA6P60900 246 aaKnown RBP9.33□□□□□ -0.92
CLCF1-202ENST00000533438 DOC2BQ14184 412 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 PDCD1Q15116 288 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 MED22Q15528 200 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 NEDD8Q15843 81 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 FAM76BQ5HYJ3 339 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 WDR38Q5JTN6 314 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 ATPAF1Q5TC12 328 aaPredicted RBP9.33□□□□□ -0.92
CLCF1-202ENST00000533438 METTL11BQ5VVY1 283 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 KRT74Q7RTS7 529 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 FAM220AQ7Z4H9 259 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.33□□□□□ -0.92
CLCF1-202ENST00000533438 TMEM86BQ8N661 226 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 LY6G5BQ8NDX9 201 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 OR8B12Q8NGG6 310 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 HPSE2Q8WWQ2 592 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 GATAD2BQ8WXI9 593 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 RORBQ92753 470 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 ZDHHC16Q969W1 377 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 TMIGD2Q96BF3 282 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 C12orf43Q96C57 262 aaKnown RBP9.33□□□□□ -0.92
CLCF1-202ENST00000533438 SEH1LQ96EE3 360 aa9.33□□□□□ -0.92
CLCF1-202ENST00000533438 FAM71F1Q96KD3 344 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms