RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CAV3P56539 151 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 RIPPLY1Q0D2K3 151 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 ZNF829Q3KNS6 432 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-212ENST00000527887 RNLSQ5VYX0 342 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 RUSC1-AS1Q66K80 236 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 FIP1L1Q6UN15 594 aaKnown RBP11.7□□□□□ -0.54
CAPN1-212ENST00000527887 ZNF788Q6ZQV5 615 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 PRSS48Q7RTY5 328 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 BBS1Q8NFJ9 593 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 BPIFB6Q8NFQ5 453 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 CNIH3Q8TBE1 160 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 RPL3LQ92901 407 aaKnown RBP11.7□□□□□ -0.54
CAPN1-212ENST00000527887 OR8B4Q96RC9 309 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 FAM192AQ9GZU8 254 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 DPAGT1Q9H3H5 408 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 PPP1R3EQ9H7J1 279 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 FAM206AQ9NX38 181 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 RASL12Q9NYN1 266 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 KLHDC2Q9Y2U9 406 aa11.7□□□□□ -0.54
CAPN1-212ENST00000527887 RPL36Q9Y3U8 105 aaKnown RBP11.7□□□□□ -0.54
CAPN1-212ENST00000527887 SMIM31A0A1B0GVY4 71 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 SLC22A31A6NKX4 558 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 SIGLEC5O15389 551 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 KNG1P01042 644 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 IGLV3-1P01715 115 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 ACAA1P09110 424 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-212ENST00000527887 AMY2BP19961 511 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 MDKP21741 143 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-212ENST00000527887 EEF1B2P24534 225 aaKnown RBP11.69□□□□□ -0.54
CAPN1-212ENST00000527887 ALDH3B2P48448 385 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 RIDAP52758 137 aaKnown RBP11.69□□□□□ -0.54
CAPN1-212ENST00000527887 RAG2P55895 527 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 VMO1Q7Z5L0 202 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 SVOPQ8N4V2 548 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 FAM216BQ8N7L0 139 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 TCEANCQ8N8B7 351 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 ANGPTL6Q8NI99 470 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 HPSE2Q8WWQ2 592 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 UBE2FQ969M7 185 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 CNN2Q99439 309 aaKnown RBP11.69□□□□□ -0.54
CAPN1-212ENST00000527887 CHIAQ9BZP6 476 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 PBOV1Q9GZY1 135 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 OR51I2Q9H344 312 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 MOB1AQ9H8S9 216 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 C1RLQ9NZP8 487 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 H2AFY2Q9P0M6 372 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-212ENST00000527887 ONECUT1Q9UBC0 465 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 NLKQ9UBE8 527 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 NUFIP1Q9UHK0 495 aaKnown RBP11.69□□□□□ -0.54
CAPN1-212ENST00000527887 FAM96BQ9Y3D0 163 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 SNX5Q9Y5X3 404 aa11.69□□□□□ -0.54
CAPN1-212ENST00000527887 CLPSL1A2RUU4 121 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 CCDC182A6NF36 153 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 OR2AT4A6NND4 320 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 M0R1W7 72 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 AKR7A2O43488 359 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 FBP1P09467 338 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 GLRA1P23415 457 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 IER3P46695 156 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 GPM6AP51674 278 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 HCCSP53701 268 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 IKZF1Q13422 519 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 KLHL22Q53GT1 634 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 AADACL4Q5VUY2 407 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 NXNL2Q5VZ03 156 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 OLFML2AQ68BL7 652 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 NCR3LG1Q68D85 454 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 MEPCEQ7L2J0 689 aaKnown RBP11.68□□□□□ -0.54
CAPN1-212ENST00000527887 GID4Q8IVV7 300 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 FCGR1BQ92637 280 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 SEH1LQ96EE3 360 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 WDR13Q9H1Z4 485 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 SLC25A10Q9UBX3 287 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-212ENST00000527887 ENPP5Q9UJA9 477 aa11.68□□□□□ -0.54
CAPN1-212ENST00000527887 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.68□□□□□ -0.54
CAPN1-212ENST00000527887 TRBV23-1A0A0A0MS06 115 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 A0A0U1RQK1 487 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 DHRS7CA6NNS2 312 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 ZNF732B4DXR9 585 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 RGS10O43665 173 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 XPNPEP2O43895 674 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 PRKYO43930 277 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 ENTPD6O75354 484 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 DHRS3O75911 302 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 ACSM1Q08AH1 577 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 GDPGP1Q6ZNW5 385 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 C17orf107Q6ZR85 190 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 COMMD2Q86X83 199 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 SPARTQ8N0X7 666 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 OR5T2Q8NGG2 359 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 OR51E1Q8TCB6 317 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 GAFA1Q96PS6 74 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 IL4I1Q96RQ9 567 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 CDCA4Q9BXL8 241 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 FGF23Q9GZV9 251 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-212ENST00000527887 METTL8Q9H825 291 aaKnown RBP11.67□□□□□ -0.54
CAPN1-212ENST00000527887 GPR84Q9NQS5 396 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 SNTG1Q9NSN8 517 aa11.67□□□□□ -0.54
CAPN1-212ENST00000527887 A0A1B0GW55 424 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 BTBD17A6NE02 478 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms