RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 IL36GQ9NZH8 169 aa13.35□□□□□ -0.27
USH1C-207ENST00000527720 FOXJ2Q9P0K8 574 aa13.35□□□□□ -0.27
USH1C-207ENST00000527720 NOSIPQ9Y314 301 aaKnown RBP13.35□□□□□ -0.27
USH1C-207ENST00000527720 KCNMB2Q9Y691 235 aa13.35□□□□□ -0.27
USH1C-207ENST00000527720 COL6A3P12111 3177 aa13.35□□□□□ -0.27
USH1C-207ENST00000527720 FAM230AA0A1W2PPH8 454 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 M0R296 226 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 MRPL33O75394 65 aaKnown RBP13.34□□□□□ -0.27
USH1C-207ENST00000527720 HTR3BO95264 441 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 CD59P13987 128 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 GABRR1P24046 479 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 FUT6P51993 359 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 ARPC4P59998 168 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 SUPT4H1P63272 117 aaKnown RBP13.34□□□□□ -0.27
USH1C-207ENST00000527720 FAM3AP98173 230 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 RPUSD3Q6P087 351 aaKnown RBP13.34□□□□□ -0.27
USH1C-207ENST00000527720 C6orf201Q7Z4U5 140 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 PXT1Q8NFP0 134 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 SPSB4Q96A44 273 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 PRDM14Q9GZV8 571 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 NARFLQ9H6Q4 476 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 PCDHB16Q9NRJ7 776 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 ZNF701Q9NV72 531 aaPredicted RBP13.34□□□□□ -0.27
USH1C-207ENST00000527720 PARPBPQ9NWS1 579 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 MBD2Q9UBB5 411 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 IGKV1-27A0A075B6S5 117 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 C13orf42A0A1B0GVH6 325 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 POM121CA8CG34 1229 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 A8MXK9 166 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 KRBOX1C9JBD0 128 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 FGF2P09038 288 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 PATE4P0C8F1 98 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 DTYMKP23919 212 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 LHX2P50458 406 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 RSPO4Q2I0M5 234 aaPredicted RBP13.34□□□□□ -0.27
USH1C-207ENST00000527720 ZSCAN4Q8NAM6 433 aaPredicted RBP13.34□□□□□ -0.27
USH1C-207ENST00000527720 POM121Q96HA1 1249 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 C1QTNF5Q9BXJ0 243 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 MCTS1Q9ULC4 181 aaKnown RBP13.34□□□□□ -0.27
USH1C-207ENST00000527720 SLC7A11Q9UPY5 501 aa13.34□□□□□ -0.27
USH1C-207ENST00000527720 C14orf166Q9Y224 244 aaKnown RBP13.34□□□□□ -0.27
USH1C-207ENST00000527720 RPL36A-HNRNPH2H7BZ11 118 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 SDCBPO00560 298 aaPredicted RBP13.33□□□□□ -0.28
USH1C-207ENST00000527720 FAM209AQ5JX71 171 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 FGFBP3Q8TAT2 258 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 ADAMTS17Q8TE56 1095 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 CYYR1Q96J86 154 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 IP6K3Q96PC2 410 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 SIGLEC12Q96PQ1 595 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 DNTTIP1Q9H147 329 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 DECR2Q9NUI1 292 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 DMDP11532 3685 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 ZNF816-ZNF321PA0A0X1KG74 233 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 B8ZZF3 427 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 F10P00742 488 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 RPS2P15880 293 aaKnown RBP13.33□□□□□ -0.28
USH1C-207ENST00000527720 CLDN18P56856 261 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 DCAF10Q5QP82 559 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 TSPO2Q5TGU0 170 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 ZNF471Q9BX82 626 aaPredicted RBP13.33□□□□□ -0.28
USH1C-207ENST00000527720 WDR13Q9H1Z4 485 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 RNF122Q9H9V4 155 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 ANXA10Q9UJ72 324 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 CSAG2Q9Y5P2 127 aa13.33□□□□□ -0.28
USH1C-207ENST00000527720 A0A1W2PNU3 283 aaPredicted RBP13.32□□□□□ -0.28
USH1C-207ENST00000527720 SPRY1O43609 319 aaPredicted RBP13.32□□□□□ -0.28
USH1C-207ENST00000527720 LYL1P12980 280 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 ZNF708P17019 499 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 LUMP51884 338 aaPredicted RBP13.32□□□□□ -0.28
USH1C-207ENST00000527720 ZNF92Q03936 586 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 ATXN7L3Q14CW9 347 aaPredicted RBP13.32□□□□□ -0.28
USH1C-207ENST00000527720 SLC9A3R2Q15599 337 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 PABPC1L2AQ5JQF8 200 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 NKAPLQ5M9Q1 402 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 COLCA1Q6ZS62 124 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 MOB3CQ70IA8 216 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 MAFIPQ8WZ33 124 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 TEX13DA0A0J9YY54 714 aaPredicted RBP13.32□□□□□ -0.28
USH1C-207ENST00000527720 ZSCAN5BA6NJL1 495 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 CDK2AP1O14519 115 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 ANGPTL7O43827 346 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 SYNGR4O95473 234 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 MT-CO3P00414 261 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 GLRA1P23415 457 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 CHATP28329 748 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 NUP62P37198 522 aaPredicted RBP13.32□□□□□ -0.28
USH1C-207ENST00000527720 AIMP2Q13155 320 aaKnown RBP13.32□□□□□ -0.28
USH1C-207ENST00000527720 OR1C1Q15619 314 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 BVESQ8NE79 360 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 STOML3Q8TAV4 291 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 BCO1Q9HAY6 547 aa13.32□□□□□ -0.28
USH1C-207ENST00000527720 TMA7Q9Y2S6 64 aaKnown RBP13.32□□□□□ -0.28
USH1C-207ENST00000527720 CTSDP07339 412 aaPredicted RBP13.31□□□□□ -0.28
USH1C-207ENST00000527720 COX5BP10606 129 aa13.31□□□□□ -0.28
USH1C-207ENST00000527720 PGAM2P15259 253 aa13.31□□□□□ -0.28
USH1C-207ENST00000527720 PI3P19957 117 aa13.31□□□□□ -0.28
USH1C-207ENST00000527720 PDZK1IP1Q13113 114 aa13.31□□□□□ -0.28
USH1C-207ENST00000527720 TAF9Q16594 264 aa13.31□□□□□ -0.28
USH1C-207ENST00000527720 ANKRD55Q3KP44 614 aa13.31□□□□□ -0.28
USH1C-207ENST00000527720 OSR2Q8N2R0 312 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms