RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 MALRD1Q5VYJ5 2156 aa14.4□□□□□ -0.1
LMX1B-203ENST00000526117 ANK3Q12955 4377 aaKnown RBP14.39□□□□□ -0.11
LMX1B-203ENST00000526117 A0A0G2JMP0 313 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 A0A0X1KG70 313 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 PTGES3LE9PB15 166 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 RHBDL1O75783 438 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 HOXB4P17483 251 aaPredicted RBP14.39□□□□□ -0.11
LMX1B-203ENST00000526117 ATF1P18846 271 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 HNF1AP20823 631 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 ZFP36P26651 326 aaKnown RBP14.39□□□□□ -0.11
LMX1B-203ENST00000526117 PITPNBP48739 271 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 RBP2P50120 134 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 ERVK11-1P61568 191 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 SEC61A1P61619 476 aaKnown RBP14.39□□□□□ -0.11
LMX1B-203ENST00000526117 PAX2Q02962 417 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 YIF1BQ5BJH7 314 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 SFRP4Q6FHJ7 346 aaPredicted RBP14.39□□□□□ -0.11
LMX1B-203ENST00000526117 LHFPL2Q6ZUX7 228 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 PRSS48Q7RTY5 328 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 OR4M2Q8NGB6 313 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 DACT3Q96B18 629 aaPredicted RBP14.39□□□□□ -0.11
LMX1B-203ENST00000526117 BORCS8Q96FH0 119 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 PGLYRP3Q96LB9 341 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 NRIP2Q9BQI9 281 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 ZCCHC4Q9H5U6 513 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 HES4Q9HCC6 221 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 BLOC1S6Q9UL45 172 aa14.39□□□□□ -0.11
LMX1B-203ENST00000526117 LSM2Q9Y333 95 aaKnown RBP14.39□□□□□ -0.11
LMX1B-203ENST00000526117 IGKV1-27A0A075B6S5 117 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 TRBV5-5A0A0J9YX44 114 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 H3BSH0 61 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 GPR37O15354 613 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 AKR7A2O43488 359 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 CD2P06729 351 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 AZGP1P25311 298 aaKnown RBP14.38□□□□□ -0.11
LMX1B-203ENST00000526117 ATP1B3P54709 279 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 GNB2P62879 340 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 HOXA4Q00056 320 aaPredicted RBP14.38□□□□□ -0.11
LMX1B-203ENST00000526117 CR1LQ2VPA4 569 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 DMRTC1Q5HYR2 192 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 FAM120AOSQ5T036 256 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 WDR25Q64LD2 544 aaPredicted RBP14.38□□□□□ -0.11
LMX1B-203ENST00000526117 LYPD2Q6UXB3 125 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 CALHM1Q8IU99 346 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 BOLLQ8N9W6 283 aaKnown RBP14.38□□□□□ -0.11
LMX1B-203ENST00000526117 DEFB108BQ8NET1 73 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 ANGPTL6Q8NI99 470 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 THRSPQ92748 146 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 GHSRQ92847 366 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 CNBD2Q96M20 576 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 DMRTB1Q96MA1 342 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 SHARPINQ9H0F6 387 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 CTSZQ9UBR2 303 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 CLN8Q9UBY8 286 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 ZFHX3Q15911 3703 aa14.38□□□□□ -0.11
LMX1B-203ENST00000526117 MXRA5Q9NR99 2828 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 RGS10O43665 173 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 SULT1B1O43704 296 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 MRPS14O60783 128 aaKnown RBP14.37□□□□□ -0.11
LMX1B-203ENST00000526117 GYPAP02724 150 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 GLRA1P23415 457 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 LCN2P80188 198 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 GPR50Q13585 617 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 SMIM21Q3B7S5 101 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 CHRFAM7AQ494W8 412 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 SLC36A1Q7Z2H8 476 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 Q8IYB0 196 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 C19orf18Q8NEA5 215 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 TSEN15Q8WW01 171 aaKnown RBP14.37□□□□□ -0.11
LMX1B-203ENST00000526117 TMIGD2Q96BF3 282 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 CPNE2Q96FN4 548 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-203ENST00000526117 OPALINQ96PE5 141 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 WDR13Q9H1Z4 485 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 SEBOXQ9HB31 216 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-203ENST00000526117 RHOFQ9HBH0 211 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 LPAR2Q9HBW0 351 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 ISYNA1Q9NPH2 558 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 NLKQ9UBE8 527 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 DNAJB11Q9UBS4 358 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 OR5V1Q9UGF6 321 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 INSIG2Q9Y5U4 225 aa14.37□□□□□ -0.11
LMX1B-203ENST00000526117 FAM230AA0A1W2PPH8 454 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 OR2AT4A6NND4 320 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 TRAPPC2LH3BP13 241 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 ADAM20O43506 726 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 SYNGR1O43759 233 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 GPX5O75715 221 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 FAM157CP0CG43 387 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 PPIAL4GP0DN37 164 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 GABARAPL2P60520 117 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 RPS11P62280 158 aaKnown RBP eCLIP14.36□□□□□ -0.11
LMX1B-203ENST00000526117 SPHARQ15513 63 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 DCAF12L2Q5VW00 463 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 CD276Q5ZPR3 534 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 ACP7Q6ZNF0 438 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 ZNF788Q6ZQV5 615 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 TRMT10AQ8TBZ6 339 aaKnown RBP14.36□□□□□ -0.11
LMX1B-203ENST00000526117 TMEM106AQ96A25 262 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 MED30Q96HR3 178 aa14.36□□□□□ -0.11
LMX1B-203ENST00000526117 TMPRSS13Q9BYE2 586 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms