RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 RFPL4AA6NLU0 287 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 TMEM210A6NLX4 147 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 LRRC30A6NM36 301 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 SRRM5B3KS81 715 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 RFPL4AL1F8VTS6 287 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 J3QT63 122 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 LGALS8O00214 317 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 GABRPO00591 440 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 HSPB6O14558 160 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 TMPRSS2O15393 492 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 SULT1B1O43704 296 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 GATBO75879 557 aaKnown RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 RGS9O75916 674 aaPredicted RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 NXPH2O95156 264 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 SERPINA3P01011 423 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 TGFAP01135 160 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 LHBP01229 141 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 CD2P06729 351 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 SFTPBP07988 381 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 WNT2P09544 360 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 TMEM225BP0DP42 221 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 RPS2P15880 293 aaKnown RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 ZNF12P17014 697 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 PRKACAP17612 351 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 ADRA2CP18825 462 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 RAB3AP20336 220 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 GLRA1P23415 457 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 TGFBR1P36897 503 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 RBP2P50120 134 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 FUT6P51993 359 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 ATP1B3P54709 279 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 DLX1P56177 255 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 GABARAPL2P60520 117 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 MRPS11P82912 194 aaKnown RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 SCN1BQ07699 218 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 LOXL1Q08397 574 aaPredicted RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 MLLT11Q13015 90 aaPredicted RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 MRPL28Q13084 256 aaKnown RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 TPBGQ13641 420 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 CNN3Q15417 329 aaKnown RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 KISS1Q15726 138 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 TBCEQ15813 527 aaPredicted RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 ZNF404Q494X3 552 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 Q499Y3 187 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 KCTD21Q4G0X4 260 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 YIF1BQ5BJH7 314 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 ZBTB37Q5TC79 503 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 DDI2Q5TDH0 399 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 C22orf42Q6IC83 251 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 FAHD2BQ6P2I3 314 aaPredicted RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 ZNF367Q7RTV3 350 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 EGFL6Q8IUX8 553 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 C1orf87Q8N0U7 546 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 SVOPQ8N4V2 548 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 JAGN1Q8N5M9 183 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 PARP16Q8N5Y8 322 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 CD177Q8N6Q3 437 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 CELF2-AS1Q8N7Q2 184 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 POC1AQ8NBT0 407 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 ZNRF1Q8ND25 227 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 TSPAN14Q8NG11 270 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 OR4M1Q8NGD0 313 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 OR5D14Q8NGL3 314 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 Q8TCH9 128 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 TNFAIP8L1Q8WVP5 186 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 PP6455Q8WZ26 134 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 ST8SIA4Q92187 359 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 H1FXQ92522 213 aaKnown RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 UFD1Q92890 307 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 HPS1Q92902 700 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 EMG1Q92979 244 aaKnown RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 MUL1Q969V5 352 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 TMIGD2Q96BF3 282 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 FAHD2AQ96GK7 314 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 TECTBQ96PL2 329 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 MYCBPQ99417 103 aaPredicted RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 GPER1Q99527 375 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 TLNRD1Q9H1K6 362 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 OR51E2Q9H255 320 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 PATZ1Q9HBE1 687 aaKnown RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 EXOSC4Q9NPD3 245 aaKnown RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 MMP26Q9NRE1 261 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 ING4Q9UNL4 249 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 LRCH1Q9Y2L9 728 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 GSTK1Q9Y2Q3 226 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 SF3B6Q9Y3B4 125 aaKnown RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 AK6Q9Y3D8 172 aaKnown RBP3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 USF3Q68DE3 2245 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 CSMD1Q96PZ7 3565 aa3.84□□□□□ -1.8
CHMP4A-202ENST00000524955 CELSR1Q9NYQ6 3014 aa3.84□□□□□ -1.8
CHMP4A-202ENST00000524955 ROS1P08922 2347 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 AKAP6Q13023 2319 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 A0A0B4J203 849 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 TRAV38-1A0A0B4J264 116 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 LOC100506127A0A0U1RQW1 187 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 SHISA3A0PJX4 238 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 OR2AT4A6NND4 320 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 DHRS7CA6NNS2 312 aa3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 KIAA1324LA8MWY0 1029 aaPredicted RBP3.83□□□□□ -1.8
CHMP4A-202ENST00000524955 INAFM1C9JVW0 142 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms