RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 ZNF691Q5VV52 312 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 KDM4DQ6B0I6 523 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 LCN12Q6JVE5 192 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 ANGPTL8Q6UXH0 198 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 RAB43Q86YS6 212 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 FUNDC1Q8IVP5 155 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 CDKL3Q8IVW4 592 aaPredicted RBP5.24□□□□□ -1.57
LSM1-202ENST00000520286 CMTM1Q8IZ96 169 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 TMEM105Q8N8V8 129 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 OR1N2Q8NGR9 330 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 GLYATL2Q8WU03 294 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 NDRG1Q92597 394 aaKnown RBP5.24□□□□□ -1.57
LSM1-202ENST00000520286 OPALINQ96PE5 141 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 LXNQ9BS40 222 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 UGT2B28Q9BY64 529 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 ING2Q9H160 280 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 LYRM4Q9HD34 91 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 CCL28Q9NRJ3 127 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 HRASLS2Q9NWW9 162 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 CMTM6Q9NX76 183 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 TAS2R9Q9NYW1 312 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 AHSPQ9NZD4 102 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 NDUFAF1Q9Y375 327 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 USP34Q70CQ2 3546 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 TRANK1O15050 2925 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 NRCAMQ92823 1304 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 A0A0G2JMZ2 1700 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 CFAP54Q96N23 3096 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 WDFY4Q6ZS81 3184 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 ARPC4-TTLL3A0A0A6YYG9 625 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 KBTBD11-OT1A0A1B0GTJ5 212 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 PNMA8CA0A1B0GUJ8 204 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 FAM92AA1XBS5 289 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 F6UB75 175 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 UBDO15205 165 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 LY6G6DO95868 133 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 SERPINA5P05154 406 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 ATF6P18850 670 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 HTR1EP28566 365 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 AQP2P41181 271 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 ACOT2P49753 483 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 GNA13Q14344 377 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 STK11Q15831 433 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 PYCR3Q53H96 274 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 XKR4Q5GH76 650 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 PLCXD3Q63HM9 321 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 LAMTOR1Q6IAA8 161 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 IL34Q6ZMJ4 242 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 CMC1Q7Z7K0 106 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 ZNF321PQ8N8H1 164 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 TMEM161BQ8NDZ6 487 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 JOSD2Q8TAC2 188 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 RORBQ92753 470 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 CERS2Q96G23 380 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 QKIQ96PU8 341 aaKnown RBP eCLIP5.23□□□□□ -1.571e-14■■■■□ 21.3
LSM1-202ENST00000520286 RNF157Q96PX1 679 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 PEBP4Q96S96 227 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 RASL11BQ9BPW5 248 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 NRIP2Q9BQI9 281 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 DCSTAMPQ9H295 470 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 LHX5Q9H2C1 402 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 MAT2BQ9NZL9 334 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 NYAP2Q9P242 653 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 CLN8Q9UBY8 286 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 GOLT1BQ9Y3E0 138 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 CHTOPQ9Y3Y2 248 aaKnown RBP5.23□□□□□ -1.57
LSM1-202ENST00000520286 HSPE1-MOB4S4R3N1 261 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 COL4A6Q14031 1691 aa5.23□□□□□ -1.57
LSM1-202ENST00000520286 AGRNO00468 2067 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 COL1A2P08123 1366 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 GLYATL1P3A0A0U1RQE8 302 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 LINC00854A0A1B0GVQ3 168 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 FAM231BA6NCW3 169 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 EFCAB9A8MZ26 197 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 SLC31A2O15432 143 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 EIF4E2O60573 245 aaKnown RBP5.22□□□□□ -1.57
LSM1-202ENST00000520286 TNFSF13O75888 250 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 PAHP00439 452 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 IFNA16P05015 189 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 HMGN1P05114 100 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 HPNP05981 417 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 CSF3P09919 207 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 PSKH1P11801 424 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 MIPP30301 263 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 CDKN1BP46527 198 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 AP1S2P56377 157 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 TFAMQ00059 246 aaKnown RBP5.22□□□□□ -1.57
LSM1-202ENST00000520286 IRF8Q02556 426 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 SLAMF1Q13291 335 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 FZD2Q14332 565 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 SF3A2Q15428 464 aaKnown RBP5.22□□□□□ -1.57
LSM1-202ENST00000520286 IMPG1Q17R60 797 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 RFX4Q33E94 735 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 PTPN20Q4JDL3 420 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 LRRC10Q5BKY1 277 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 CYHR1Q6ZMK1 362 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 C20orf203Q8NBC4 194 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 OR2L5Q8NG80 312 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 LYPD6BQ8NI32 183 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 MCOLN3Q8TDD5 553 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms