RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 PRTN3P24158 256 aa20.33■□□□□ 0.85
PVT1-204ENST00000517525 HAAOP46952 286 aa20.33■□□□□ 0.85
PVT1-204ENST00000517525 ACTA2P62736 377 aa20.33■□□□□ 0.85
PVT1-204ENST00000517525 ACTG2P63267 376 aa20.33■□□□□ 0.85
PVT1-204ENST00000517525 DMRTC1Q5HYR2 192 aa20.33■□□□□ 0.85
PVT1-204ENST00000517525 TMEM244Q5VVB8 128 aa20.33■□□□□ 0.85
PVT1-204ENST00000517525 MRPL48Q96GC5 212 aaKnown RBP20.33■□□□□ 0.85
PVT1-204ENST00000517525 PKIBQ9C010 78 aa20.33■□□□□ 0.85
PVT1-204ENST00000517525 CHST5Q9GZS9 411 aa20.33■□□□□ 0.85
PVT1-204ENST00000517525 INPP5EQ9NRR6 644 aa20.33■□□□□ 0.85
PVT1-204ENST00000517525 SMPD3Q9NY59 655 aaPredicted RBP20.33■□□□□ 0.85
PVT1-204ENST00000517525 GATBO75879 557 aaKnown RBP20.32■□□□□ 0.84
PVT1-204ENST00000517525 IGHA1P01876 353 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 SFTPBP07988 381 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 OR12D2P58182 307 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 RAB40BQ12829 278 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 GALEQ14376 348 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 DGUOKQ16854 277 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 SMIM21Q3B7S5 101 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 LPCAT4Q643R3 524 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 ACP7Q6ZNF0 438 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 C1orf122Q6ZSJ8 110 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 SYS1Q8N2H4 156 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 FGFRL1Q8N441 504 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 PP6455Q8WZ26 134 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 C1orf147Q96MC9 270 aaPredicted RBP20.32■□□□□ 0.84
PVT1-204ENST00000517525 NRIP2Q9BQI9 281 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 PCGF1Q9BSM1 259 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 PLEKHA1Q9HB21 404 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 HES4Q9HCC6 221 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 FRRS1LQ9P0K9 344 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 AASSQ9UDR5 926 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 SLC7A11Q9UPY5 501 aa20.32■□□□□ 0.84
PVT1-204ENST00000517525 CENPVL3A0A0U1RRI6 287 aa20.31■□□□□ 0.84
PVT1-204ENST00000517525 LOC107986453A0A1B0GWG9 222 aa20.31■□□□□ 0.84
PVT1-204ENST00000517525 FADS2O95864 444 aaKnown RBP20.31■□□□□ 0.84
PVT1-204ENST00000517525 GMFBP60983 142 aa20.31■□□□□ 0.84
PVT1-204ENST00000517525 ERVK11-1P61568 191 aa20.31■□□□□ 0.84
PVT1-204ENST00000517525 ARF6P62330 175 aa20.31■□□□□ 0.84
PVT1-204ENST00000517525 IL24Q13007 206 aa20.31■□□□□ 0.84
PVT1-204ENST00000517525 IKZF1Q13422 519 aa20.31■□□□□ 0.84
PVT1-204ENST00000517525 UBE2V2Q15819 145 aa20.31■□□□□ 0.84
PVT1-204ENST00000517525 METAP1DQ6UB28 335 aaPredicted RBP20.31■□□□□ 0.84
PVT1-204ENST00000517525 PACRGLQ8N7B6 248 aa20.31■□□□□ 0.84
PVT1-204ENST00000517525 PELI1Q96FA3 418 aa20.31■□□□□ 0.84
PVT1-204ENST00000517525 ZNF649Q9BS31 505 aa20.31■□□□□ 0.84
PVT1-204ENST00000517525 SLC25A10Q9UBX3 287 aaPredicted RBP20.31■□□□□ 0.84
PVT1-204ENST00000517525 RPL36Q9Y3U8 105 aaKnown RBP20.31■□□□□ 0.84
PVT1-204ENST00000517525 MAB21L2Q9Y586 359 aa20.31■□□□□ 0.84
PVT1-204ENST00000517525 ANK2Q01484 3957 aa20.3■□□□□ 0.84
PVT1-204ENST00000517525 IGHV3OR16-10A0A075B7F0 116 aa20.3■□□□□ 0.84
PVT1-204ENST00000517525 SYNGR1O43759 233 aa20.3■□□□□ 0.84
PVT1-204ENST00000517525 SERPINA3P01011 423 aa20.3■□□□□ 0.84
PVT1-204ENST00000517525 RPSAP08865 295 aaKnown RBP20.3■□□□□ 0.84
PVT1-204ENST00000517525 SELLP14151 372 aa20.3■□□□□ 0.84
PVT1-204ENST00000517525 FUT6P51993 359 aa20.3■□□□□ 0.84
PVT1-204ENST00000517525 MRPL28Q13084 256 aaKnown RBP20.3■□□□□ 0.84
PVT1-204ENST00000517525 ODF4Q2M2E3 257 aa20.3■□□□□ 0.84
PVT1-204ENST00000517525 UTS2BQ765I0 119 aa20.3■□□□□ 0.84
PVT1-204ENST00000517525 DNAAF1Q8NEP3 725 aa20.3■□□□□ 0.84
PVT1-204ENST00000517525 APH1BQ8WW43 257 aa20.3■□□□□ 0.84
PVT1-204ENST00000517525 JAM3Q9BX67 310 aa20.3■□□□□ 0.84
PVT1-204ENST00000517525 NOX4Q9NPH5 578 aa20.3■□□□□ 0.84
PVT1-204ENST00000517525 DNAJC9-AS1A6NH13 148 aa20.29■□□□□ 0.84
PVT1-204ENST00000517525 A6NIN4 97 aa20.29■□□□□ 0.84
PVT1-204ENST00000517525 NANOS3P60323 173 aaKnown RBP20.29■□□□□ 0.84
PVT1-204ENST00000517525 BAMBIQ13145 260 aa20.29■□□□□ 0.84
PVT1-204ENST00000517525 CALHM1Q8IU99 346 aa20.29■□□□□ 0.84
PVT1-204ENST00000517525 CMTM4Q8IZR5 234 aa20.29■□□□□ 0.84
PVT1-204ENST00000517525 ZNF555Q8NEP9 628 aa20.29■□□□□ 0.84
PVT1-204ENST00000517525 UNKLQ9H9P5 680 aaKnown RBP20.29■□□□□ 0.84
PVT1-204ENST00000517525 MYRFQ9Y2G1 1151 aa20.29■□□□□ 0.84
PVT1-204ENST00000517525 TRBV23-1A0A0A0MS06 115 aa20.28■□□□□ 0.84
PVT1-204ENST00000517525 OR4C45A6NMZ5 311 aa20.28■□□□□ 0.84
PVT1-204ENST00000517525 RNASE1P07998 156 aaKnown RBP20.28■□□□□ 0.84
PVT1-204ENST00000517525 HTR1AP08908 422 aa20.28■□□□□ 0.84
PVT1-204ENST00000517525 KLHL22Q53GT1 634 aa20.28■□□□□ 0.84
PVT1-204ENST00000517525 RDH10Q8IZV5 341 aa20.28■□□□□ 0.84
PVT1-204ENST00000517525 HAVCR2Q8TDQ0 301 aa20.28■□□□□ 0.84
PVT1-204ENST00000517525 GATAD2BQ8WXI9 593 aa20.28■□□□□ 0.84
PVT1-204ENST00000517525 C4orf36Q96KX1 117 aa20.28■□□□□ 0.84
PVT1-204ENST00000517525 ALG8Q9BVK2 526 aa20.28■□□□□ 0.84
PVT1-204ENST00000517525 SEBOXQ9HB31 216 aaPredicted RBP20.28■□□□□ 0.84
PVT1-204ENST00000517525 ERVK13-1Q9NX77 482 aa20.28■□□□□ 0.84
PVT1-204ENST00000517525 SOX21Q9Y651 276 aaPredicted RBP20.28■□□□□ 0.84
PVT1-204ENST00000517525 IGHV1-69DA0A0B4J2H0 117 aa20.27■□□□□ 0.84
PVT1-204ENST00000517525 J3QLW9 94 aa20.27■□□□□ 0.84
PVT1-204ENST00000517525 WBP4O75554 376 aaKnown RBP20.27■□□□□ 0.84
PVT1-204ENST00000517525 IGHV1-69P01742 117 aa20.27■□□□□ 0.84
PVT1-204ENST00000517525 ZNF19P17023 458 aa20.27■□□□□ 0.84
PVT1-204ENST00000517525 GABRA2P47869 451 aa20.27■□□□□ 0.84
PVT1-204ENST00000517525 ACTG1P63261 375 aa20.27■□□□□ 0.84
PVT1-204ENST00000517525 CNN3Q15417 329 aaKnown RBP20.27■□□□□ 0.84
PVT1-204ENST00000517525 SLC9A3R2Q15599 337 aa20.27■□□□□ 0.84
PVT1-204ENST00000517525 BRD3OSQ6XYD6 125 aa20.27■□□□□ 0.84
PVT1-204ENST00000517525 ZNF561Q8N587 486 aa20.27■□□□□ 0.84
PVT1-204ENST00000517525 GCDHQ92947 438 aaPredicted RBP20.27■□□□□ 0.84
PVT1-204ENST00000517525 AMBNQ9NP70 447 aa20.27■□□□□ 0.84
PVT1-204ENST00000517525 HHLA2Q9UM44 414 aa20.27■□□□□ 0.84
PVT1-204ENST00000517525 IGKV1-27A0A075B6S5 117 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms