RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ANKRD37Q7Z713 158 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 LINC00518Q8N0U6 118 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 GCNT2Q8N0V5 402 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 ZNF321PQ8N8H1 164 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 RGP1Q92546 391 aaPredicted RBP9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 MSI2Q96DH6 328 aaKnown RBP9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 VSTM2LQ96N03 204 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 IP6K3Q96PC2 410 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 TRBV5-5A0A0J9YX44 114 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 DCTN6O00399 190 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 UPK3AO75631 287 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 CCL4P13236 92 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 HOXA1P49639 335 aaPredicted RBP9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 DHODHQ02127 395 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 ACER2Q5QJU3 275 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 ZDHHC22Q8N966 263 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 NOXO1Q8NFA2 376 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 OR2AE1Q8NHA4 323 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 AUP1Q9Y679 476 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 A0A1W2PR80 420 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 SPEM2Q0P670 501 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 ZNF266Q14584 549 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 FHL5Q5TD97 284 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 WDSUB1Q8N9V3 476 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 KCNE4Q8WWG9 221 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 PLK3Q9H4B4 646 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 SLC22A20A6NK97 555 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 PRRG2O14669 202 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 KCNAB3O43448 404 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 KIR3DL2P43630 455 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 NOVA1P51513 510 aaKnown RBP9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 OR1C1Q15619 314 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 SLC36A1Q7Z2H8 476 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 MRPL41Q8IXM3 137 aaKnown RBP9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 FBXL14Q8N1E6 418 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 SLC30A7Q8NEW0 376 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 ALX4Q9H161 411 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 MMP26Q9NRE1 261 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 RPH3ALQ9UNE2 315 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 A0A087WZY1 265 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 TRIM77I1YAP6 450 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 RAB1AP62820 205 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 PJVKQ0ZLH3 352 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 IL11RAQ14626 422 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 GUCA2BQ16661 112 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 Q6ZRG5 221 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 ATG4DQ86TL0 474 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 OR13C8Q8NGS7 320 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 PLPPR2Q96GM1 343 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 MAGT1Q9H0U3 335 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 TMEM74BQ9NUR3 256 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 COL4A4P53420 1690 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 ZFP92A6NM28 416 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 A8MXE2 369 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 ZNF354AO60765 605 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 SFTA3P0C7M3 94 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 MEOX2P50222 304 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 HTD2P86397 168 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 HIST2H3PS2Q5TEC6 136 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 TMEM268Q5VZI3 342 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 NAA40Q86UY6 237 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 C20orf196Q8IYI0 205 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 SMRP1Q8NCR6 262 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 TAAR9Q96RI9 348 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 RNF150Q9ULK6 438 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 POLDIP2Q9Y2S7 368 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 FRMPD3Q5JV73 1810 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 CHD7Q9P2D1 2997 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 A0A087WV48 116 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 F12P00748 615 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 HPNP05981 417 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 AADACP22760 399 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 MPGP29372 298 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 ARR3P36575 388 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 ELLP55199 621 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 ZNF345Q14585 488 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 RHBDD2Q6NTF9 364 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 IL34Q6ZMJ4 242 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 RTN4IP1Q8WWV3 396 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 KPTNQ9Y664 436 aa9.62□□□□□ -0.87
PCDHGA1-202ENST00000517417 TDRD6O60522 2096 aaKnown RBP9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 PATE3B3GLJ2 98 aa9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 H7C1Q1 480 aa9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 XRCC2O43543 280 aa9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 LRP3O75074 770 aa9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 GLRA1P23415 457 aa9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 TLE4Q04727 773 aa9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 HMGN3Q15651 99 aa9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 PUSL1Q8N0Z8 303 aaKnown RBP9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 OR2G3Q8NGZ4 309 aa9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 OCIAD1Q9NX40 245 aa9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 VSIG4Q9Y279 399 aa9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 CCDC187A0A096LP49 1063 aa9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 TO15178 435 aa9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 OR13C7P0DN81 318 aa9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 SPINK2P20155 84 aa9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 ECI1P42126 302 aa9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 SNRPEP62304 92 aaKnown RBP9.61□□□□□ -0.87
PCDHGA1-202ENST00000517417 SPANXN5Q5MJ07 72 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms