RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 LSM3P62310 102 aaKnown RBP4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 SCN1BQ07699 218 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 ZNF154Q13106 437 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 PDZK1IP1Q13113 114 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 RAB11BQ15907 218 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 SSX1Q16384 188 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 TMEM255AQ5JRV8 349 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 GPR107Q5VW38 600 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 AWAT2Q6E213 333 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 SFRP4Q6FHJ7 346 aaPredicted RBP4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 ZNF826PQ6ZT77 177 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 KRT74Q7RTS7 529 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 SLC36A1Q7Z2H8 476 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 TPRA1Q86W33 373 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 CLVS1Q8IUQ0 354 aaPredicted RBP4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 CROCCP3Q8IVE0 287 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 SAXO1Q8IYX7 474 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 FAM58AQ8N1B3 248 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 POC1AQ8NBT0 407 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 OR8B3Q8NGG8 313 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 OR52N4Q8NGI2 321 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 OR51A2Q8NGJ7 313 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 OR5D18Q8NGL1 313 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 PPP1R35Q8TAP8 253 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 Q8TCH9 128 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 C10orf105Q8TEF2 133 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 HPSE2Q8WWQ2 592 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 AQP3Q92482 292 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 YIPF5Q969M3 257 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 RNF166Q96A37 237 aaPredicted RBP4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 PHF21AQ96BD5 680 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 SPACA5Q96QH8 159 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 OR8B2Q96RD0 313 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 UQCC2Q9BRT2 126 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 REG4Q9BYZ8 158 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 CST11Q9H112 138 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 OR51E2Q9H255 320 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 METTL17Q9H7H0 456 aaPredicted RBP4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 PPP1R3EQ9H7J1 279 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 RHOFQ9HBH0 211 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 TXNL4BQ9NX01 149 aaKnown RBP4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 NLKQ9UBE8 527 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 GHRLQ9UBU3 117 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 MIOXQ9UGB7 285 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 OR14J1Q9UGF5 321 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 AK6Q9Y3D8 172 aaKnown RBP4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 WIPI2Q9Y4P8 454 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 V9GY05 133 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 RELNP78509 3460 aa4.6□□□□□ -1.67
SCARNA16.4-201ENST00000516956 TRAV8-7A0A075B6U6 113 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 IGHV3OR15-7A0A075B7D8 119 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 TRAV1-2A0A0B4J238 106 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 IGKV1-9A0A0C4DH69 117 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 FUOMA2VDF0 154 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 TRIM64CA6NLI5 447 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 OR2AT4A6NND4 320 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 RNF223E7ERA6 249 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 DEGS1O15121 323 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 ADAM20O43506 726 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 SYNGR1O43759 233 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 ANGPTL7O43827 346 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 NOS1APO75052 506 aaPredicted RBP4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 ANKRD17O75179 2603 aaKnown RBP4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 CRTAPO75718 401 aaPredicted RBP4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 RHBDL1O75783 438 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 CDRT1O95170 752 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 ZNF205O95201 554 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 PTBP3O95758 552 aaKnown RBP4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 GYPAP02724 150 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 GTF2F2P13984 249 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 ZNF44P15621 663 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 ARSBP15848 533 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 IGFBP3P17936 291 aaPredicted RBP4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 CPT2P23786 658 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 GIFP27352 417 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 HTR2CP28335 458 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 FGF9P31371 208 aaPredicted RBP4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 SOX6P35712 828 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 CFHR2P36980 270 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 SERPINB10P48595 397 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 MTNR1BP49286 362 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 SNU13P55769 128 aaKnown RBP4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 RPS11P62280 158 aaKnown RBP eCLIP4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 GNB2P62879 340 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 MRPS15P82914 257 aaKnown RBP4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 MXD1Q05195 221 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 INSL4Q14641 139 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 SLC22A6Q4U2R8 563 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 TMEM155Q4W5P6 130 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 ESCO2Q56NI9 601 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 LRRC10Q5BKY1 277 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 FAM76BQ5HYJ3 339 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 FAM27D1Q5T7N8 215 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 CD276Q5ZPR3 534 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 GLIPR1L1Q6UWM5 242 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 WDR82Q6UXN9 313 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 TMEM91Q6ZNR0 172 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 DCDC5Q6ZRR9 648 aa4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 LRRC28Q86X40 367 aaPredicted RBP4.59□□□□□ -1.67
SCARNA16.4-201ENST00000516956 FAM90A1Q86YD7 464 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms