RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 ZNF436Q9C0F3 470 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-557P-201ENST00000516842 IL22Q9GZX6 179 aa-1.96□□□□□ -2.72
RNU6-557P-201ENST00000516842 RRAGDQ9NQL2 400 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-557P-201ENST00000516842 CFDP1Q9UEE9 299 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-557P-201ENST00000516842 ADAM28Q9UKQ2 775 aa-1.96□□□□□ -2.72
RNU6-557P-201ENST00000516842 YLPM1P49750 1951 aaKnown RBP-1.96□□□□□ -2.72
RNU6-557P-201ENST00000516842 SLX4Q8IY92 1834 aa-1.96□□□□□ -2.72
RNU6-557P-201ENST00000516842 CSMD3Q7Z407 3707 aa-1.96□□□□□ -2.72
RNU6-557P-201ENST00000516842 FAT2Q9NYQ8 4349 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 TSPAN11A1L157 253 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 SYCE1LA8MT33 242 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 GOSR2O14653 212 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 ZBTB5O15062 677 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 POLR2DO15514 142 aaKnown RBP-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 EEF1E1O43324 174 aaKnown RBP-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 PRM1P04553 51 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 FGF4P08620 206 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 TROVE2P10155 538 aaKnown RBP eCLIP-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 MLNP12872 115 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 ETS1P14921 441 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 CCR1P32246 355 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 SPINT3P49223 89 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 NUCB2P80303 420 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 ZNF117Q03924 483 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 VPS26BQ4G0F5 336 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 C1orf185Q5T7R7 199 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 C7orf65Q6ZTY9 151 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 TAF8Q7Z7C8 310 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 OR52E2Q8NGJ4 325 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 FIBINQ8TAL6 211 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 TCP10LQ8TDR4 215 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 CXorf40AQ8TE69 158 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 C2orf15Q8WU43 125 aaKnown RBP-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 CYGBQ8WWM9 190 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 THRSPQ92748 146 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 MAL2Q969L2 176 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 HIST1H2BAQ96A08 127 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 TMEM230Q96A57 120 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 CPB2Q96IY4 423 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 RNF170Q96K19 258 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 RDH12Q96NR8 316 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 OR5B12Q96R08 314 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 CNN2Q99439 309 aaKnown RBP-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 API5Q9BZZ5 524 aaKnown RBP-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 SLC5A7Q9GZV3 580 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 LRRC40Q9H9A6 602 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 POLDIP2Q9Y2S7 368 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 LINC00588Q9Y4M8 146 aa-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 CHD3Q12873 2000 aaKnown RBP-1.97□□□□□ -2.72
RNU6-557P-201ENST00000516842 RPGRIP1LQ68CZ1 1315 aa-1.97□□□□□ -2.73
RNU6-557P-201ENST00000516842 MXRA5Q9NR99 2828 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 C15orf38-AP3S2A0A0A6YYH1 394 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 TRAPPC13A5PLN9 417 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 C11orf86A6NJI1 115 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 RGS5O15539 181 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 RNF113AO15541 343 aaKnown RBP-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 PRKAB2O43741 272 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 AQP8O94778 261 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 CLIC3O95833 236 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 PDYNP01213 254 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 HLA-AP01891 365 aaKnown RBP-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 ERCC1P07992 297 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 ABHD2P08910 425 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 PSKH1P11801 424 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 NCF2P19878 526 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 IL32P24001 234 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 RNASE4P34096 147 aaKnown RBP-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 GGT2P36268 569 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 GPX6P59796 221 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 GRB2P62993 217 aaKnown RBP-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 MESDQ14696 234 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 TMEM236Q5W0B7 351 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 TMEM42Q69YG0 159 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 MBOAT2Q6ZWT7 520 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 CCDC50Q8IVM0 306 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 RNF148Q8N7C7 305 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 OR4D5Q8NGN0 318 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 OR2A1Q8NGT9 310 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 FAM213BQ8TBF2 198 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 ACMSDQ8TDX5 336 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 PYURFQ96I23 114 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 PKNOX2Q96KN3 472 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 C7orf34Q96L11 122 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 ALS2CR12Q96Q35 445 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 PPA2Q9H2U2 334 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 ANKHQ9HCJ1 492 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 TXNL4BQ9NX01 149 aaKnown RBP-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 BTRCQ9Y297 605 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 GOLT1BQ9Y3E0 138 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 ARAP3Q8WWN8 1544 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 PIEZO2Q9H5I5 2752 aa-1.98□□□□□ -2.73
RNU6-557P-201ENST00000516842 CITO14578 2027 aa-1.99□□□□□ -2.73
RNU6-557P-201ENST00000516842 TRAV41A0A0B4J266 112 aa-1.99□□□□□ -2.73
RNU6-557P-201ENST00000516842 LOC105371045A0A1W2PR82 267 aa-1.99□□□□□ -2.73
RNU6-557P-201ENST00000516842 NCBP2LA6PVI3 153 aaKnown RBP-1.99□□□□□ -2.73
RNU6-557P-201ENST00000516842 K7EPK0 472 aa-1.99□□□□□ -2.73
RNU6-557P-201ENST00000516842 BTN3A3O00478 584 aa-1.99□□□□□ -2.73
RNU6-557P-201ENST00000516842 SLC25A20O43772 301 aa-1.99□□□□□ -2.73
RNU6-557P-201ENST00000516842 CRYGDP07320 174 aa-1.99□□□□□ -2.73
RNU6-557P-201ENST00000516842 ZNF3P17036 446 aa-1.99□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms