RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, human

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-243	ENST00000515160	IGHV3-48	P01763	117 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	APOA1	P02647	267 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	SERPINA7	P05543	415 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	NR2C1	P13056	603 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	FOLR2	P14207	255 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	ZNF250	P15622	560 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	CTRB1	P17538	263 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	SDC4	P31431	198 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	AQP2	P41181	271 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	VDAC2	P45880	294 aa	Predicted RBP	4.21	□□□□□ -1.74
CAST-243	ENST00000515160	OR3A4P	P47883	348 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	SUB1	P53999	127 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
CAST-243	ENST00000515160	STX17	P56962	302 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	NUP107	P57740	925 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	UBE2M	P61081	183 aa	Known RBP	4.21	□□□□□ -1.74
CAST-243	ENST00000515160	STXBP1	P61764	594 aa	Known RBP	4.21	□□□□□ -1.74
CAST-243	ENST00000515160	LCN2	P80188	198 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	ZNF763	Q0D2J5	394 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	EXOC3L4	Q17RC7	722 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	ZNF658B	Q4V348	819 aa	Predicted RBP	4.21	□□□□□ -1.74
CAST-243	ENST00000515160	C1orf100	Q5SVJ3	147 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	GPR157	Q5UAW9	335 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	CTRB2	Q6GPI1	263 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	CGB2	Q6NT52	195 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	CNIH2	Q6PI25	160 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	FAM122B	Q7Z309	247 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.21	□□□□□ -1.74
CAST-243	ENST00000515160	TCAIM	Q8N3R3	496 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	HSD17B11	Q8NBQ5	300 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	TMEM35B	Q8NCS4	154 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	OR4E2	Q8NGC2	313 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	OR4A15	Q8NGL6	344 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	FAM57A	Q8TBR7	257 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	LRRC20	Q8TCA0	184 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	NAT14	Q8WUY8	206 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	DUS3L	Q96G46	650 aa	Known RBP	4.21	□□□□□ -1.74
CAST-243	ENST00000515160	OR5B12	Q96R08	314 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	CHRNA10	Q9GZZ6	450 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	KCNJ16	Q9NPI9	418 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	QPCTL	Q9NXS2	382 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	RWDD2A	Q9UIY3	292 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	ASF1A	Q9Y294	204 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	PRSS21	Q9Y6M0	314 aa		4.21	□□□□□ -1.74
CAST-243	ENST00000515160	BIRC6	Q9NR09	4857 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	TRAV6	A0A075B6T7	132 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	IGHV1-45	A0A0A0MS14	117 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	C1orf232	A0A0U1RR37	186 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	C12orf77	C9JDV5	145 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	DFFA	O00273	331 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	ZNF354A	O60765	605 aa	Predicted RBP	4.2	□□□□□ -1.74
CAST-243	ENST00000515160	POP7	O75817	140 aa	Known RBP	4.2	□□□□□ -1.74
CAST-243	ENST00000515160	SERF1A	O75920	110 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	CDK14	O94921	469 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	KRT16	P08779	473 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	PMCH	P20382	165 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	PRKACB	P22694	351 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	FMO3	P31513	532 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	HSPA9	P38646	679 aa	Known RBP	4.2	□□□□□ -1.74
CAST-243	ENST00000515160	DLX1	P56177	255 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	TPI1	P60174	286 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	RPS15A	P62244	130 aa	Known RBP	4.2	□□□□□ -1.74
CAST-243	ENST00000515160	ZNF92	Q03936	586 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	EGFEM1P	Q0D2K5	195 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	SLA	Q13239	276 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160		Q1RN00	199 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	ZNF620	Q6ZNG0	422 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	TRAM1L1	Q8N609	369 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	OR10H4	Q8NGA5	316 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	OR9G1	Q8NH87	305 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	APH1A	Q96BI3	265 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	ATP6V1G3	Q96LB4	118 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	IMMP1L	Q96LU5	166 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	ZNF285	Q96NJ3	590 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	TRIB3	Q96RU7	358 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	ARHGDIG	Q99819	225 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	EBF4	Q9BQW3	602 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	POLR2J2	Q9GZM3	115 aa	Known RBP	4.2	□□□□□ -1.74
CAST-243	ENST00000515160	POLR2J3	Q9H1A7	115 aa	Known RBP	4.2	□□□□□ -1.74
CAST-243	ENST00000515160	MRM3	Q9HC36	420 aa	Known RBP	4.2	□□□□□ -1.74
CAST-243	ENST00000515160	IMP3	Q9NV31	184 aa	Known RBP	4.2	□□□□□ -1.74
CAST-243	ENST00000515160	AIG1	Q9NVV5	245 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	GNPTG	Q9UJJ9	305 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	DNAJC12	Q9UKB3	198 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	FAM215A	Q9Y5M1	114 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	KPTN	Q9Y664	436 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	KIAA1549	Q9HCM3	1950 aa		4.2	□□□□□ -1.74
CAST-243	ENST00000515160	PCNX3	Q9H6A9	2034 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	EPPK1	P58107	5090 aa	Known RBP	4.19	□□□□□ -1.74
CAST-243	ENST00000515160	IGLV3-12	A0A075B6K2	115 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	KIR2DL5B	A0A0G2JN68	375 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	KIR2DL5B	A0A0G2JPC4	375 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160		A0A1B0GX78	115 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	LYRM9	A8MSI8	78 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	HSBP1L1	C9JCN9	74 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	SCAMP2	O15127	329 aa	Known RBP	4.19	□□□□□ -1.74
CAST-243	ENST00000515160	ZNF780A	O75290	641 aa	Predicted RBP	4.19	□□□□□ -1.74
CAST-243	ENST00000515160	LSM8	O95777	96 aa	Known RBP	4.19	□□□□□ -1.74
CAST-243	ENST00000515160	PEBP1	P30086	187 aa	Known RBP	4.19	□□□□□ -1.74
CAST-243	ENST00000515160	RORC	P51449	518 aa		4.19	□□□□□ -1.74
CAST-243	ENST00000515160	P2RY4	P51582	365 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms