RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 RAP1BP61224 184 aa5.68□□□□□ -1.5
CLDND1-229ENST00000513988 LCN6P62502 163 aa5.68□□□□□ -1.5
CLDND1-229ENST00000513988 RAP1AP62834 184 aa5.68□□□□□ -1.5
CLDND1-229ENST00000513988 AGBL2Q5U5Z8 902 aa5.68□□□□□ -1.5
CLDND1-229ENST00000513988 ZNF613Q6PF04 617 aa5.68□□□□□ -1.5
CLDND1-229ENST00000513988 Q6ZR54 194 aa5.68□□□□□ -1.5
CLDND1-229ENST00000513988 ZBTB46Q86UZ6 589 aa5.68□□□□□ -1.5
CLDND1-229ENST00000513988 LYPD1Q8N2G4 141 aa5.68□□□□□ -1.5
CLDND1-229ENST00000513988 ABHD12Q8N2K0 398 aa5.68□□□□□ -1.5
CLDND1-229ENST00000513988 C11orf45Q8TAV5 145 aa5.68□□□□□ -1.5
CLDND1-229ENST00000513988 TRMT10AQ8TBZ6 339 aaKnown RBP5.68□□□□□ -1.5
CLDND1-229ENST00000513988 CREB3L1Q96BA8 519 aa5.68□□□□□ -1.5
CLDND1-229ENST00000513988 MICU1Q9BPX6 476 aa5.68□□□□□ -1.5
CLDND1-229ENST00000513988 MDFICQ9P1T7 246 aa5.68□□□□□ -1.5
CLDND1-229ENST00000513988 MYRFQ9Y2G1 1151 aa5.68□□□□□ -1.5
CLDND1-229ENST00000513988 FAM183AA6NL82 134 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 RFPL4AA6NLU0 287 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 NCBP2LA6PVI3 153 aaKnown RBP5.67□□□□□ -1.5
CLDND1-229ENST00000513988 TMEM233B4DJY2 109 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 RFPL4AL1F8VTS6 287 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 DLGAP1O14490 977 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 ARPC1BO15143 372 aaKnown RBP5.67□□□□□ -1.5
CLDND1-229ENST00000513988 TPST2O60704 377 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 OR7A10O76100 309 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 LGALS1P09382 135 aaKnown RBP5.67□□□□□ -1.5
CLDND1-229ENST00000513988 P0DMU3 169 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 FAM231AP0DMU4 169 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 FAM231CP0DMU5 169 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 DDOSTP39656 456 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 NPBWR2P48146 333 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 TPTEP56180 551 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 EDDM3BP56851 147 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 HIST1H3AP68431 136 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 MLANAQ16655 118 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 SNAI3Q3KNW1 292 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 KRTAP27-1Q3LI81 207 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 ALG10Q5BKT4 473 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 GLYATL3Q5SZD4 288 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 HIST2H3PS2Q5TEC6 136 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 DHRS4L2Q6PKH6 230 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 CORO6Q6QEF8 472 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 HIST2H3AQ71DI3 136 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 CCDC80Q76M96 950 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 SPATA12Q7Z6I5 190 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 LCA5Q86VQ0 697 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 TGIF2LXQ8IUE1 241 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 CD177Q8N6Q3 437 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 UBALD1Q8TB05 177 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 RTL8AQ9BWD3 113 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 RERGLQ9H628 205 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 SLA2Q9H6Q3 261 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 SP140LQ9H930 580 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 GRPEL1Q9HAV7 217 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 BCL2L10Q9HD36 194 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 PCDHB16Q9NRJ7 776 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 LIN7CQ9NUP9 197 aaKnown RBP5.67□□□□□ -1.5
CLDND1-229ENST00000513988 THUMPD1Q9NXG2 353 aaKnown RBP5.67□□□□□ -1.5
CLDND1-229ENST00000513988 BTNL2Q9UIR0 455 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 PIGLQ9Y2B2 252 aa5.67□□□□□ -1.5
CLDND1-229ENST00000513988 LOC102724200A0A096LPH7 203 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-229ENST00000513988 TEX13CA0A0J9YWL9 993 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 TMEM210A6NLX4 147 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 ANXA2P2A6NMY6 339 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 C5orf58C9J3I9 102 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 H3BS24 57 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 TPST1O60507 370 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 MTRF1O75570 445 aaKnown RBP5.66□□□□□ -1.5
CLDND1-229ENST00000513988 TK1P04183 234 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 HSPB1P04792 205 aaKnown RBP5.66□□□□□ -1.5
CLDND1-229ENST00000513988 PRDX2P32119 198 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 S100A3P33764 101 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 CDKN2CP42773 168 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 RAB9AP51151 201 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 MFAP2P55001 183 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 MAD2L1Q13257 205 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-229ENST00000513988 TAF13Q15543 124 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 KCNMB1Q16558 191 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 DEFB135Q30KP9 77 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 SPANXN4Q5MJ08 99 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 Q6ZWC4 215 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 RTN4RL2Q86UN3 420 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 LAX1Q8IWV1 398 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 MCHR1Q99705 422 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 NAPGQ99747 312 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-229ENST00000513988 OPA3Q9H6K4 179 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 LHFPL6Q9Y693 200 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 DSCAML1Q8TD84 2053 aa5.66□□□□□ -1.5
CLDND1-229ENST00000513988 IGHV4-4A0A075B6R2 117 aa5.65□□□□□ -1.5
CLDND1-229ENST00000513988 CPSF4LA6NMK7 179 aaKnown RBP5.65□□□□□ -1.5
CLDND1-229ENST00000513988 DBX1A6NMT0 343 aa5.65□□□□□ -1.5
CLDND1-229ENST00000513988 ZNF850A8MQ14 1090 aa5.65□□□□□ -1.5
CLDND1-229ENST00000513988 BUB1B-PAK6H3BSN5 160 aa5.65□□□□□ -1.5
CLDND1-229ENST00000513988 M0R135 149 aa5.65□□□□□ -1.5
CLDND1-229ENST00000513988 TOR1AO14656 332 aa5.65□□□□□ -1.5
CLDND1-229ENST00000513988 IGKV1D-33P01593 117 aa5.65□□□□□ -1.5
CLDND1-229ENST00000513988 IGKV1-33P01594 117 aa5.65□□□□□ -1.5
CLDND1-229ENST00000513988 IGLV1-47P01700 117 aa5.65□□□□□ -1.5
CLDND1-229ENST00000513988 VIMP08670 466 aaKnown RBP5.65□□□□□ -1.5
CLDND1-229ENST00000513988 TROVE2P10155 538 aaKnown RBP eCLIP5.65□□□□□ -1.5
CLDND1-229ENST00000513988 CTRB1P17538 263 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms