RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678	HRASLS5	Q96KN8	279 aa		13.81	□□□□□ -0.2
MATR3-222	ENST00000513678	RIBC2	Q9H4K1	309 aa		13.81	□□□□□ -0.2
MATR3-222	ENST00000513678	BEX1	Q9HBH7	125 aa		13.81	□□□□□ -0.2
MATR3-222	ENST00000513678	TNFRSF19	Q9NS68	423 aa		13.81	□□□□□ -0.2
MATR3-222	ENST00000513678	SNTG1	Q9NSN8	517 aa		13.81	□□□□□ -0.2
MATR3-222	ENST00000513678	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.81	□□□□□ -0.2
MATR3-222	ENST00000513678	TRBV23-1	A0A0A0MS06	115 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	PQLC2L	A1A4F0	135 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	SAC3D1	A6NKF1	404 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678		H3BNX3	289 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678		J3QT63	122 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678		M0R1W7	72 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	IGHV4-59	P01825	116 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	PGA5	P0DJD9	388 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	IER3	P46695	156 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	HAGHL	Q6PII5	290 aa	Predicted RBP	13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	TREML4	Q6UXN2	200 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	C10orf67	Q8IYJ2	551 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678		Q8N7P7	452 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	TBC1D15	Q8TC07	691 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	TNFRSF14	Q92956	283 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	ONECUT1	Q9UBC0	465 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.8	□□□□□ -0.2	3e-10	■■□□□ 12.3
MATR3-222	ENST00000513678	GTF2A1L	Q9UNN4	478 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	SLC22A13	Q9Y226	551 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	POLDIP2	Q9Y2S7	368 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	MAB21L2	Q9Y586	359 aa		13.8	□□□□□ -0.2
MATR3-222	ENST00000513678	KNG1	P01042	644 aa		13.79	□□□□□ -0.2
MATR3-222	ENST00000513678	CRYBA1	P05813	215 aa		13.79	□□□□□ -0.2
MATR3-222	ENST00000513678	GMFB	P60983	142 aa		13.79	□□□□□ -0.2
MATR3-222	ENST00000513678	SNRPG	P62308	76 aa	Known RBP	13.79	□□□□□ -0.2
MATR3-222	ENST00000513678	GUCA2A	Q02747	115 aa		13.79	□□□□□ -0.2
MATR3-222	ENST00000513678	SMIM21	Q3B7S5	101 aa		13.79	□□□□□ -0.2
MATR3-222	ENST00000513678	OLFML2A	Q68BL7	652 aa		13.79	□□□□□ -0.2
MATR3-222	ENST00000513678	ACP7	Q6ZNF0	438 aa		13.79	□□□□□ -0.2
MATR3-222	ENST00000513678	PLEKHG7	Q6ZR37	379 aa		13.79	□□□□□ -0.2
MATR3-222	ENST00000513678	PDZD9	Q8IXQ8	264 aa		13.79	□□□□□ -0.2
MATR3-222	ENST00000513678	YIPF7	Q8N8F6	280 aa		13.79	□□□□□ -0.2
MATR3-222	ENST00000513678	RORB	Q92753	470 aa		13.79	□□□□□ -0.2
MATR3-222	ENST00000513678	NRIP2	Q9BQI9	281 aa		13.79	□□□□□ -0.2
MATR3-222	ENST00000513678	SIRT7	Q9NRC8	400 aa		13.79	□□□□□ -0.2
MATR3-222	ENST00000513678	CLPSL1	A2RUU4	121 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	RNASEK-C17orf49	H0YIS7	233 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678		J3QRE1	110 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	GPR137B	O60478	399 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	TFF1	P04155	84 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	HAAO	P46952	286 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	ALDH3A2	P51648	485 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	KPNB1	Q14974	876 aa	Known RBP	13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	OCLN	Q16625	522 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	MEDAG	Q5VYS4	303 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	CCDC121	Q6ZUS5	278 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	OR10H4	Q8NGA5	316 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	C10orf35	Q96D05	121 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	TBX5	Q99593	518 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	CITED1	Q99966	193 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	PKIB	Q9C010	78 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	METTL8	Q9H825	291 aa	Known RBP	13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	HES4	Q9HCC6	221 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	GPR173	Q9NS66	373 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	ZNRD1	Q9P1U0	126 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	CAB39	Q9Y376	341 aa	Predicted RBP	13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	ORC6	Q9Y5N6	252 aa		13.78	□□□□□ -0.2
MATR3-222	ENST00000513678	ANKRD61	A6NGH8	418 aa		13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	EI24	O14681	340 aa		13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	KCNAB3	O43448	404 aa		13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	ATP6V1E1	P36543	226 aa		13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	ERVK11-1	P61568	191 aa		13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	ACTC1	P68032	377 aa		13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	ACTA1	P68133	377 aa		13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	ZNF85	Q03923	595 aa		13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	SRSF4	Q08170	494 aa	Known RBP	13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	IL24	Q13007	206 aa		13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	NCR3LG1	Q68D85	454 aa		13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	KCTD20	Q7Z5Y7	419 aa		13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	ZNF561	Q8N587	486 aa		13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	H1FX	Q92522	213 aa	Known RBP	13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	RNF166	Q96A37	237 aa	Predicted RBP	13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	IMPAD1	Q9NX62	359 aa		13.77	□□□□□ -0.21
MATR3-222	ENST00000513678	SYT7	O43581	403 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	SYNGR1	O43759	233 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	RPP14	O95059	124 aa	Known RBP	13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	FBP1	P09467	338 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	UBC	P0CG48	685 aa	Known RBP	13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	NDUFB7	P17568	137 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	GABRA2	P47869	451 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	UBE2E1	P51965	193 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	DLX1	P56177	255 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	TAF9	Q16594	264 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	DMRTC1	Q5HYR2	192 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	FDX2	Q6P4F2	183 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	C17orf107	Q6ZR85	190 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	EGFL6	Q8IUX8	553 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	PRSS35	Q8N3Z0	413 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	CD177	Q8N6Q3	437 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	ZNRF1	Q8ND25	227 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	LINC01006	Q8NI28	216 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	CHST5	Q9GZS9	411 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	DPAGT1	Q9H3H5	408 aa		13.76	□□□□□ -0.21
MATR3-222	ENST00000513678	PLEKHA1	Q9HB21	404 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms