RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 GAFA1Q96PS6 74 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 NUDT16L1Q9BRJ7 211 aaKnown RBP8.03□□□□□ -1.12
RNF4-221ENST00000513643 ALG8Q9BVK2 526 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 PKIBQ9C010 78 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 SIRPDQ9H106 197 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 DCLRE1BQ9H816 532 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 GPR173Q9NS66 373 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 NLKQ9UBE8 527 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 RPUSD1Q9UJJ7 312 aaKnown RBP8.03□□□□□ -1.12
RNF4-221ENST00000513643 NUP50Q9UKX7 468 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 MAB21L2Q9Y586 359 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 OR2AT4A6NND4 320 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 ZNF879B4DU55 563 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 H0YJX3 145 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 J3QLW9 94 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 TMPRSS2O15393 492 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 SYNGR1O43759 233 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 ENSAO43768 121 aaKnown RBP8.02□□□□□ -1.13
RNF4-221ENST00000513643 ZFPL1O95159 310 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 MT-ND2P03891 347 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 GNAO1P09471 354 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 IGHV4-38-2P0DP08 117 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 ZNF19P17023 458 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 DCKP27707 260 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 HAAOP46952 286 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 FUT6P51993 359 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 CAV3P56539 151 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 MRPL28Q13084 256 aaKnown RBP8.02□□□□□ -1.13
RNF4-221ENST00000513643 SCGB2A2Q13296 93 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 ODF4Q2M2E3 257 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 PLCXD3Q63HM9 321 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 ZNF529Q6P280 563 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 BTNL3Q6UXE8 466 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 ACP7Q6ZNF0 438 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 BTN2A1Q7KYR7 527 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 SLC36A1Q7Z2H8 476 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 FAM220AQ7Z4H9 259 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 COMMD2Q86X83 199 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 PIP4P2Q8N4L2 257 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 DHRSXQ8N5I4 330 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 FAM216BQ8N7L0 139 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 OR5T2Q8NGG2 359 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 OR51A4Q8NGJ6 313 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 OR10AC1Q8NH08 325 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 CNIH3Q8TBE1 160 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 HAVCR2Q8TDQ0 301 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 NRG4Q8WWG1 115 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 MED30Q96HR3 178 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 TBX15Q96SF7 602 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 MYCBPQ99417 103 aaPredicted RBP8.02□□□□□ -1.13
RNF4-221ENST00000513643 DCTN5Q9BTE1 182 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 MRI1Q9BV20 369 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 ADI1Q9BV57 179 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 ESM1Q9NQ30 184 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 PLCXD1Q9NUJ7 323 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 MTCH1Q9NZJ7 389 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 ZNF69Q9UC07 566 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 GTF2A1LQ9UNN4 478 aa8.02□□□□□ -1.13
RNF4-221ENST00000513643 DIMT1Q9UNQ2 313 aaKnown RBP8.02□□□□□ -1.13
RNF4-221ENST00000513643 F8VVB4 439 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 F8VWA3 439 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 RPSAP08865 295 aaKnown RBP8.01□□□□□ -1.13
RNF4-221ENST00000513643 HTR1AP08908 422 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 PIPP12273 146 aaPredicted RBP8.01□□□□□ -1.13
RNF4-221ENST00000513643 SELLP14151 372 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 GLRA1P23415 457 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 CAPGP40121 348 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 ETV1P50549 477 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 BPIFB3P59826 476 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 FGF12P61328 243 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 SRSF2Q01130 221 aaKnown RBP8.01□□□□□ -1.13
RNF4-221ENST00000513643 SLC34A1Q06495 639 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 CCDC58Q4VC31 144 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 ASPHD2Q6ICH7 369 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 C1orf122Q6ZSJ8 110 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 KCTD8Q6ZWB6 473 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 ANGPTL5Q86XS5 388 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 BCL6BQ8N143 479 aaPredicted RBP8.01□□□□□ -1.13
RNF4-221ENST00000513643 PARP16Q8N5Y8 322 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 CD177Q8N6Q3 437 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 ZDHHC22Q8N966 263 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 GGHQ92820 318 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 MRPL48Q96GC5 212 aaKnown RBP8.01□□□□□ -1.13
RNF4-221ENST00000513643 C1orf147Q96MC9 270 aaPredicted RBP8.01□□□□□ -1.13
RNF4-221ENST00000513643 ZNF48Q96MX3 618 aaPredicted RBP8.01□□□□□ -1.13
RNF4-221ENST00000513643 CNTD2Q9H8S5 307 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 UNKLQ9H9P5 680 aaKnown RBP8.01□□□□□ -1.13
RNF4-221ENST00000513643 SNTG1Q9NSN8 517 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 FKBP14Q9NWM8 211 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 HHLA2Q9UM44 414 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 POLDIP2Q9Y2S7 368 aa8.01□□□□□ -1.13
RNF4-221ENST00000513643 CAB39Q9Y376 341 aaPredicted RBP8.01□□□□□ -1.13
RNF4-221ENST00000513643 SIRT4Q9Y6E7 314 aaPredicted RBP8.01□□□□□ -1.13
RNF4-221ENST00000513643 TMEM212A6NML5 194 aa8□□□□□ -1.13
RNF4-221ENST00000513643 RNF212BA8MTL3 300 aa8□□□□□ -1.13
RNF4-221ENST00000513643 OGG1O15527 345 aa8□□□□□ -1.13
RNF4-221ENST00000513643 GATBO75879 557 aaKnown RBP8□□□□□ -1.13
RNF4-221ENST00000513643 TFF1P04155 84 aa8□□□□□ -1.13
RNF4-221ENST00000513643 ATF1P18846 271 aa8□□□□□ -1.13
RNF4-221ENST00000513643 FPR2P25090 351 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms