RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 SKP2Q13309 424 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 OR8G2PQ6IF36 304 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 BTNL8Q6UX41 500 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 THOC3Q96J01 351 aaKnown RBP10.05□□□□□ -0.8
TCOF1-211ENST00000513346 GGACTQ9BVM4 153 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 ZDHHC11Q9H8X9 412 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 CARHSP1Q9Y2V2 147 aaKnown RBP10.05□□□□□ -0.8
TCOF1-211ENST00000513346 ZNF729A6NN14 1252 aaPredicted RBP10.05□□□□□ -0.8
TCOF1-211ENST00000513346 DLK1P80370 383 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 IL13RA2Q14627 380 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 SP6Q3SY56 376 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 OR4C5Q8NGB2 326 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 RPS4Y2Q8TD47 263 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 CALHM2Q9HA72 323 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 PIPOXQ9P0Z9 390 aa10.05□□□□□ -0.8
TCOF1-211ENST00000513346 MRPS2Q9Y399 296 aaKnown RBP10.05□□□□□ -0.8
TCOF1-211ENST00000513346 H3BQ15 152 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 GPR37O15354 613 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 PPICP45877 212 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 CDX1P47902 265 aaPredicted RBP10.04□□□□□ -0.8
TCOF1-211ENST00000513346 EFNB2P52799 333 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 ZNF684Q5T5D7 378 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 ZNF574Q6ZN55 896 aaPredicted RBP10.04□□□□□ -0.8
TCOF1-211ENST00000513346 REC114Q7Z4M0 266 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 C8orf44Q96CB5 159 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 IP6K3Q96PC2 410 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 LAT2Q9GZY6 243 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 MBD1Q9UIS9 605 aaPredicted RBP10.04□□□□□ -0.8
TCOF1-211ENST00000513346 PLXNB2O15031 1838 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 ACTL6BO94805 426 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 SEC11BP0C7V7 166 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 MSR1P21757 451 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 FAM53BQ14153 422 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 TMEM183BQ1AE95 376 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 CA13Q8N1Q1 262 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 SLC26A10Q8NG04 563 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 MMP25Q9NPA2 562 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 OBP2BQ9NPH6 170 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 VSIG4Q9Y279 399 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 TMEM184BQ9Y519 407 aaPredicted RBP10.04□□□□□ -0.8
TCOF1-211ENST00000513346 ANKUB1A6NFN9 424 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 NKX2-2O95096 273 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 HNRNPA3P51991 378 aaKnown RBP10.04□□□□□ -0.8
TCOF1-211ENST00000513346 ERVK-16P61578 105 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 FOXO1Q12778 655 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 NPEPL1Q8NDH3 523 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 GJC3Q8NFK1 279 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 LRRC61Q9BV99 259 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 MIA3Q5JRA6 1907 aa10.04□□□□□ -0.8
TCOF1-211ENST00000513346 NPIPB9F8W1W9 429 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 HSD17B6O14756 317 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 GALR1P47211 349 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 ASCL1P50553 236 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 PTTG1IPP53801 180 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 HSF1Q00613 529 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 TMEM241Q24JQ0 296 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 KMT5CQ86Y97 462 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 SFTPA1Q8IWL2 248 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 SLC35G3Q8N808 338 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 SLC25A43Q8WUT9 341 aaPredicted RBP10.03□□□□□ -0.8
TCOF1-211ENST00000513346 FAM103A1Q9BTL3 118 aaKnown RBP10.03□□□□□ -0.8
TCOF1-211ENST00000513346 EMC6Q9BV81 110 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 SMDT1Q9H4I9 107 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 OR14J1Q9UGF5 321 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 IL17BQ9UHF5 180 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 TMED3Q9Y3Q3 217 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 TRAPPC1Q9Y5R8 145 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 LIPGQ9Y5X9 500 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 SLC31A2O15432 143 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 RPLP1P05386 114 aaKnown RBP10.03□□□□□ -0.8
TCOF1-211ENST00000513346 ACAA1P09110 424 aaPredicted RBP10.03□□□□□ -0.8
TCOF1-211ENST00000513346 CRYBA2P53672 197 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 SLC37A1P57057 533 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 PRTGQ2VWP7 1150 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 LURAP1LQ8IV03 231 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 OR10A7Q8NGE5 316 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 ARHGAP5-AS1Q96IT6 56 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 DNAJB12Q9NXW2 375 aaKnown RBP10.03□□□□□ -0.8
TCOF1-211ENST00000513346 GOLT1BQ9Y3E0 138 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 KIR2DS1A0A191URI9 304 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 LILRA5A6NI73 299 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 NRG2O14511 850 aaPredicted RBP10.03□□□□□ -0.8
TCOF1-211ENST00000513346 KCNAB3O43448 404 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 MMP7P09237 267 aaPredicted RBP10.03□□□□□ -0.8
TCOF1-211ENST00000513346 KIR2DS4P43632 304 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 KRTDAPP60985 99 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 MZT1Q08AG7 82 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 KIR2DS1Q14954 304 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 HLA-BQ31612 363 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 ZNF813Q6ZN06 617 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 ZADH2Q8N4Q0 377 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 ADAD2Q8NCV1 583 aaKnown RBP10.03□□□□□ -0.8
TCOF1-211ENST00000513346 OR52N4Q8NGI2 321 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 ACTR3CQ9C0K3 210 aaPredicted RBP10.03□□□□□ -0.8
TCOF1-211ENST00000513346 FBXO34Q9NWN3 711 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 LOXL2Q9Y4K0 774 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 TET1Q8NFU7 2136 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 LRP5LA4QPB2 252 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 APOA2P02652 100 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 MYF5P13349 255 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms