RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 MUC1P15941 1255 aaPredicted RBP16.91■□□□□ 0.3
USP53-203ENST00000507597 GLRA1P23415 457 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 MDH2P40926 338 aaKnown RBP16.91■□□□□ 0.3
USP53-203ENST00000507597 BTG1P62324 171 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 PDZK1IP1Q13113 114 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 GPR176Q14439 515 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 MICBQ29980 383 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 SPRNQ5BIV9 151 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 ANGPTL5Q86XS5 388 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 C11orf53Q8IXP5 236 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 SPICQ8N5J4 248 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 JAGN1Q8N5M9 183 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 OR52N4Q8NGI2 321 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 OR51A2Q8NGJ7 313 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 OR13F1Q8NGS4 319 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 Q96MF0 132 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 METTL17Q9H7H0 456 aaPredicted RBP16.91■□□□□ 0.3
USP53-203ENST00000507597 DNAJB11Q9UBS4 358 aa16.91■□□□□ 0.3
USP53-203ENST00000507597 TRAV8-7A0A075B6U6 113 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 ISPDA4D126 451 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 SRRM5B3KS81 715 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 LGALS8O00214 317 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 AIREO43918 545 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 ZNF780AO75290 641 aaPredicted RBP16.9■□□□□ 0.3
USP53-203ENST00000507597 LHBP01229 141 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 PMELP40967 661 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 NR4A2P43354 598 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 INSL4Q14641 139 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 TMEM155Q4W5P6 130 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 C22orf42Q6IC83 251 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 DNM1P46Q6ZS02 220 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 ZNF826PQ6ZT77 177 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 SLC25A26Q70HW3 274 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 TPRA1Q86W33 373 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 FAM90A1Q86YD7 464 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 POC1AQ8NBT0 407 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 PXT1Q8NFP0 134 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 OR51F2Q8NH61 342 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 TMIGD2Q96BF3 282 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 C12orf43Q96C57 262 aaKnown RBP16.9■□□□□ 0.3
USP53-203ENST00000507597 YIPF6Q96EC8 236 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 CEP19Q96LK0 163 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 CHCHD6Q9BRQ6 235 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 FGF23Q9GZV9 251 aaPredicted RBP16.9■□□□□ 0.3
USP53-203ENST00000507597 TXNL4BQ9NX01 149 aaKnown RBP16.9■□□□□ 0.3
USP53-203ENST00000507597 GHRLQ9UBU3 117 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 GLS2Q9UI32 602 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 PCDHB10Q9UN67 800 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 WIPI2Q9Y4P8 454 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 CACNG2Q9Y698 323 aa16.9■□□□□ 0.3
USP53-203ENST00000507597 LOC100506127A0A0U1RQW1 187 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 OOEPA6NGQ2 149 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 NXPH2O95156 264 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 TFAP2AP05549 437 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 PGA5P0DJD9 388 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 GADD45AP24522 165 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 PTGFRP43088 359 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 ALDH3B2P48448 385 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 SMIM21Q3B7S5 101 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 CALHM1Q8IU99 346 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 GCSAMQ8N6F7 178 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 BOLLQ8N9W6 283 aaKnown RBP16.89■□□□□ 0.29
USP53-203ENST00000507597 TNFAIP8L1Q8WVP5 186 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 BPESC1Q9GZL8 116 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 FAM192AQ9GZU8 254 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 METTL9Q9H1A3 318 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 OR51E2Q9H255 320 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 SMURF1Q9HCE7 757 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 ARID1AO14497 2285 aa16.89■□□□□ 0.29
USP53-203ENST00000507597 ITPR2Q14571 2701 aa16.88■□□□□ 0.29
USP53-203ENST00000507597 IGKV1-27A0A075B6S5 117 aa16.88■□□□□ 0.29
USP53-203ENST00000507597 AKR7A2O43488 359 aa16.88■□□□□ 0.29
USP53-203ENST00000507597 NOL3O60936 208 aaKnown RBP16.88■□□□□ 0.29
USP53-203ENST00000507597 PLATP00750 562 aa16.88■□□□□ 0.29
USP53-203ENST00000507597 MTNR1BP49286 362 aa16.88■□□□□ 0.29
USP53-203ENST00000507597 CAPZA1P52907 286 aa16.88■□□□□ 0.29
USP53-203ENST00000507597 FAM27D1Q5T7N8 215 aa16.88■□□□□ 0.29
USP53-203ENST00000507597 ASPHD2Q6ICH7 369 aa16.88■□□□□ 0.29
USP53-203ENST00000507597 LRRC28Q86X40 367 aaPredicted RBP16.88■□□□□ 0.29
USP53-203ENST00000507597 RFT1Q96AA3 541 aa16.88■□□□□ 0.29
USP53-203ENST00000507597 ORAI1Q96D31 301 aa16.88■□□□□ 0.29
USP53-203ENST00000507597 RAB39BQ96DA2 213 aa16.88■□□□□ 0.29
USP53-203ENST00000507597 SPACA5Q96QH8 159 aa16.88■□□□□ 0.29
USP53-203ENST00000507597 GAL3ST1Q99999 423 aa16.88■□□□□ 0.29
USP53-203ENST00000507597 ELL3Q9HB65 397 aaPredicted RBP16.88■□□□□ 0.29
USP53-203ENST00000507597 IGHV4-30-2A0A087WSY4 118 aa16.87■□□□□ 0.29
USP53-203ENST00000507597 VWC2LB2RUY7 222 aa16.87■□□□□ 0.29
USP53-203ENST00000507597 SYNGR1O43759 233 aa16.87■□□□□ 0.29
USP53-203ENST00000507597 RHBDL1O75783 438 aa16.87■□□□□ 0.29
USP53-203ENST00000507597 CSTBP04080 98 aaKnown RBP16.87■□□□□ 0.29
USP53-203ENST00000507597 UBBP0CG47 229 aa16.87■□□□□ 0.29
USP53-203ENST00000507597 RAB3BP20337 219 aa16.87■□□□□ 0.29
USP53-203ENST00000507597 USF1P22415 310 aaPredicted RBP16.87■□□□□ 0.29
USP53-203ENST00000507597 RSU1Q15404 277 aa16.87■□□□□ 0.29
USP53-203ENST00000507597 TEX36Q5VZQ5 186 aa16.87■□□□□ 0.29
USP53-203ENST00000507597 LRRTM1Q86UE6 522 aa16.87■□□□□ 0.29
USP53-203ENST00000507597 LURAP1LQ8IV03 231 aa16.87■□□□□ 0.29
USP53-203ENST00000507597 FUNDC2Q9BWH2 189 aa16.87■□□□□ 0.29
USP53-203ENST00000507597 PLGRKTQ9HBL7 147 aa16.87■□□□□ 0.29
USP53-203ENST00000507597 MIOXQ9UGB7 285 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms