RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 POM121CA8CG34 1229 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FAM90A22PA8MWA6 464 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FAM90A12PA8MX19 464 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FAM90A5PA8MXJ8 464 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FAM90A23PA8MXZ1 464 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 ZNF732B4DXR9 585 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 E9PI62 339 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 F5H0A9 414 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-205ENST00000506880 J3QLI3 93 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 MAGEB4O15481 346 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-205ENST00000506880 PPIHO43447 177 aaKnown RBP7.12□□□□□ -1.27
PDGFC-205ENST00000506880 LILRA1O75019 489 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 BPNT1O95861 308 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 KNG1P01042 644 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 UCHL1P09936 223 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FAM90A15PP0C7V4 464 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FAM90A13PP0C7W8 464 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FAM90A14PP0C7W9 464 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FAM90A24PP0C7X0 464 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 PGA5P0DJD9 388 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 CD99P14209 185 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 AZGP1P25311 298 aaKnown RBP7.12□□□□□ -1.27
PDGFC-205ENST00000506880 BDKRB2P30411 391 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 KCNJ3P48549 501 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 GPM6AP51674 278 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 PRSS12P56730 875 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 SCAND1P57086 179 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 RPS11P62280 158 aaKnown RBP eCLIP7.12□□□□□ -1.27
PDGFC-205ENST00000506880 PAX5Q02548 391 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 CD276Q5ZPR3 534 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 WDR82Q6UXN9 313 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 ASCL4Q6XD76 172 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 MOB3CQ70IA8 216 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 MOGAT3Q86VF5 341 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 TPRA1Q86W33 373 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 CROCCP3Q8IVE0 287 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 PHC2Q8IXK0 858 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 SCCPDHQ8NBX0 429 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 CHST4Q8NCG5 386 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 TSPAN14Q8NG11 270 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 YIPF5Q969M3 257 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FGGYQ96C11 551 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 ADAT3Q96EY9 351 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-205ENST00000506880 DERL3Q96Q80 235 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 BCL7BQ9BQE9 202 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 NRIP2Q9BQI9 281 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 KRTAP4-6Q9BYQ5 205 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 TTTY10Q9BZA0 68 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 BPESC1Q9GZL8 116 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FAM234AQ9H0X4 552 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 NCOR1P1Q9H4R4 102 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 METTL17Q9H7H0 456 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-205ENST00000506880 PATZ1Q9HBE1 687 aaKnown RBP7.12□□□□□ -1.27
PDGFC-205ENST00000506880 HES4Q9HCC6 221 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 SNTG1Q9NSN8 517 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 LPAR3Q9UBY5 353 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 WIPI2Q9Y4P8 454 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 MTORP42345 2549 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 IGHV4-30-2A0A087WSY4 118 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 FUOMA2VDF0 154 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 C5orf63A6NC05 138 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 NKX6-3A6NJ46 265 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 TRAPPC2LH3BP13 241 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 PDCD5O14737 125 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 RGS9O75916 674 aaPredicted RBP7.11□□□□□ -1.27
PDGFC-205ENST00000506880 LALBAP00709 142 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 IGHV2-5P01817 119 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 GLAP06280 429 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 INHBBP09529 407 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 COL8A2P25067 703 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 HAAOP46952 286 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 MTNR1BP49286 362 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 GTF2A1P52655 376 aaPredicted RBP7.11□□□□□ -1.27
PDGFC-205ENST00000506880 MTCP1P56278 107 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 CAV3P56539 151 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 BPIFB3P59826 476 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 ERVK11-1P61568 191 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 PDZK1IP1Q13113 114 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 ZNF146Q15072 292 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 KISS1Q15726 138 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 UBE2V2Q15819 145 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 ACSM3Q53FZ2 586 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 ARMCX4Q5H9R4 360 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 GLT8D1Q68CQ7 371 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 KCTD8Q6ZWB6 473 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 C11orf53Q8IXP5 236 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 ZCCHC24Q8N2G6 241 aaKnown RBP7.11□□□□□ -1.27
PDGFC-205ENST00000506880 ZNF561Q8N587 486 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 GCSAMQ8N6F7 178 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 LINC01356Q8N9X3 169 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 OR8B3Q8NGG8 313 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 OR51A2Q8NGJ7 313 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 OR5D13Q8NGL4 314 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 OR51F2Q8NH61 342 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 PPP1R35Q8TAP8 253 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 TMIGD2Q96BF3 282 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 NEIL1Q96FI4 390 aaPredicted RBP7.11□□□□□ -1.27
PDGFC-205ENST00000506880 CEP19Q96LK0 163 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 OR5M11Q96RB7 305 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 OR8B2Q96RD0 313 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms