RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 IGHV2-5P01817 119 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 BMP4P12644 408 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 FOSL1P15407 271 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 GADD45AP24522 165 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 BDKRB2P30411 391 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 CDKN1AP38936 164 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 SLC3A1Q07837 685 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 KISS1Q15726 138 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 ZNF788Q6ZQV5 615 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 OR2Z1Q8NG97 314 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 COX4I2Q96KJ9 171 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 MICU1Q9BPX6 476 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 SLC17A2O00624 439 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 ZNF737O75373 536 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 IL1AP01583 271 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 GLAP06280 429 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 OCM2P0CE71 109 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 RAB3AP20336 220 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 IL13RA2Q14627 380 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 SPIN3Q5JUX0 258 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 OR10AD1Q8NGE0 317 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 MRPS24Q96EL2 167 aaKnown RBP6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 SAP30LQ9HAJ7 183 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 HMG20AQ9NP66 347 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 GPR173Q9NS66 373 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 ERCC1P07992 297 aaPredicted RBP6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 RAB6AP20340 208 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 RBP2P50120 134 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 EGLN1Q9GZT9 426 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 OR51E2Q9H255 320 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 OR51B6Q9H340 312 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 ANAPC10Q9UM13 185 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 CACNG2Q9Y698 323 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 IGKV1D-17A0A075B6S4 117 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 A0A1W2PPW3 197 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 ZNF732B4DXR9 585 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 RHBDL1O75783 438 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 TPPPO94811 219 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 TNFSF4P23510 183 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 MNDAP41218 407 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 PDLIM4P50479 330 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 FGF12P61328 243 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 ZMYND11Q15326 602 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM27D1Q5T7N8 215 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 ZNF880Q6PDB4 577 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 C1QL2Q7Z5L3 287 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 ZCCHC24Q8N2G6 241 aaKnown RBP6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 GAFA1Q96PS6 74 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 CENPOQ9BU64 300 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 PAPOLGQ9BWT3 736 aaKnown RBP6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM234AQ9H0X4 552 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 TMEM165Q9HC07 324 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 RNF7Q9UBF6 113 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 POU2F3Q9UKI9 436 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 F8VVB4 439 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 F8VWA3 439 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 BPNT1O95861 308 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 WNT2P09544 360 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 PPIAL4GP0DN37 164 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 FOXB2Q5VYV0 432 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 BARHL1Q9BZE3 327 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 SHARPINQ9H0F6 387 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 DCAF16Q9NXF7 216 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 TREM2Q9NZC2 230 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 TRBV6-6A0A0A6YYG2 114 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 PLSCR5A0PG75 271 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 AIPO00170 330 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 NDUFA2O43678 99 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 SYNGR1O43759 233 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 ARL6IP5O75915 188 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 UBBP0CG47 229 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 CGB3P0DN86 165 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 CGB7P0DN87 165 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 CD36P16671 472 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 ERP29P30040 261 aaKnown RBP6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 PTGFRP43088 359 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 GPM6AP51674 278 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 DLX6P56179 175 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 BTG1P62324 171 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 UNC119Q13432 240 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 NKPD1Q17RQ9 610 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 VHLLQ6RSH7 139 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 DCDC5Q6ZRR9 648 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 OR4D6Q8NGJ1 314 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 SLC25A46Q96AG3 418 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 CPNE2Q96FN4 548 aaPredicted RBP6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 Q96M66 194 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 CNTD2Q9H8S5 307 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 SNTG1Q9NSN8 517 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 DUSP13Q9UII6 198 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 IGHV4-30-2A0A087WSY4 118 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 OOEPA6NGQ2 149 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 SRSF7Q16629 238 aaKnown RBP eCLIP6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 PRAMEF6Q5VXH4 476 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 PLCXD3Q63HM9 321 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 CEACAM19Q7Z692 300 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 ZNF525Q8N782 197 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 DYNC2LI1Q8TCX1 351 aa6.91□□□□□ -1.3
CDC42SE2-208ENST00000505065 RPL3LQ92901 407 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms