RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 WDR82Q6UXN9 313 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 C1orf87Q8N0U7 546 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 RAB2BQ8WUD1 216 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 AQP3Q92482 292 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 PKIBQ9C010 78 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 ELL3Q9HB65 397 aaPredicted RBP11.45□□□□□ -0.58
CPNE1-227ENST00000498056 PLGRKTQ9HBL7 147 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 SMURF1Q9HCE7 757 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 MYOZ1Q9NP98 299 aaPredicted RBP11.45□□□□□ -0.58
CPNE1-227ENST00000498056 TMEM106BQ9NUM4 274 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 PRRC2AP48634 2157 aaKnown RBP11.45□□□□□ -0.58
CPNE1-227ENST00000498056 CR1P17927 2039 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 NAV2Q8IVL1 2488 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 DOCK11Q5JSL3 2073 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 MEGF11A6BM72 1044 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 TRIM64BA6NI03 449 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 AKR7A2O43488 359 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 RP2O75695 350 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 ALDOBP05062 364 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 EGR1P18146 543 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 PDLIM4P50479 330 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 ZP1P60852 638 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 IL24Q13007 206 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 Q5PR19 223 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 HES5Q5TA89 166 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 CLEC2AQ6UVW9 174 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 C19orf18Q8NEA5 215 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 Q8TCH9 128 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 ERGIC1Q969X5 290 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 ISOC1Q96CN7 298 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 MBD6Q96DN6 1003 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 ZNF488Q96MN9 340 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 S100A13Q99584 98 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 GFI1Q99684 422 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 CHODLQ9H9P2 273 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 DLL4Q9NR61 685 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 RNF7Q9UBF6 113 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 MRPS28Q9Y2Q9 187 aaKnown RBP11.44□□□□□ -0.58
CPNE1-227ENST00000498056 V9GY05 133 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 ITPR2Q14571 2701 aa11.44□□□□□ -0.58
CPNE1-227ENST00000498056 ISPDA4D126 451 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 C3orf80F5H4A9 247 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 TRAPPC2LH3BP13 241 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 CSF3P09919 207 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 CLEC2LP0C7M8 214 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 PAX1P15863 534 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 COL8A2P25067 703 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 MPZP25189 248 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 PMELP40967 661 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 P2RY14Q15391 338 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 CTF1Q16619 201 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 FAM76BQ5HYJ3 339 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 FAM201AQ5SY85 155 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 AVPI1Q5T686 147 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 CRIP3Q6Q6R5 217 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 MKXQ8IYA7 352 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 POC1AQ8NBT0 407 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 OR4D6Q8NGJ1 314 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 OR6M1Q8NGM8 313 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 NDNFQ8TB73 568 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 CEP19Q96LK0 163 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 PIMREGQ9BSJ6 248 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 CNTD2Q9H8S5 307 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 DNAJB11Q9UBS4 358 aa11.43□□□□□ -0.58
CPNE1-227ENST00000498056 IGKV1-12A0A0C4DH73 117 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 TMEM178BH3BS89 294 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 IFNL4K9M1U5 179 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 WNT9BO14905 357 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 PPIHO43447 177 aaKnown RBP11.42□□□□□ -0.58
CPNE1-227ENST00000498056 NXPH2O95156 264 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 ZNF205O95201 554 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 IGKV1D-12P01611 117 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 PGA5P0DJD9 388 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 BCL3P20749 454 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 SERPINA2P20848 420 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 GLRA1P23415 457 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 HTR2CP28335 458 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 TMBIM6P55061 237 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 SNU13P55769 128 aaKnown RBP11.42□□□□□ -0.58
CPNE1-227ENST00000498056 CAV3P56539 151 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 MRPS11P82912 194 aaKnown RBP11.42□□□□□ -0.58
CPNE1-227ENST00000498056 PDZK1IP1Q13113 114 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 RSU1Q15404 277 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 RAB11BQ15907 218 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 ZNF181Q2M3W8 571 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 USP43Q70EL4 1123 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 PEG10Q86TG7 708 aaKnown RBP11.42□□□□□ -0.58
CPNE1-227ENST00000498056 TPRA1Q86W33 373 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 NR2C2APQ86WQ0 139 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 C11orf53Q8IXP5 236 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 LRRC75A-AS1Q8N1F1 130 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 GCSAMQ8N6F7 178 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 OR10Z1Q8NGY1 313 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 OR51F2Q8NH61 342 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 ZNF671Q8TAW3 534 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 FAM168AQ92567 244 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 EMG1Q92979 244 aaKnown RBP11.42□□□□□ -0.58
CPNE1-227ENST00000498056 FOXRED1Q96CU9 486 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-227ENST00000498056 TIMD4Q96H15 378 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 UQCC2Q9BRT2 126 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms