RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 CLOCKO15516 846 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 GMDSO60547 372 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 SULT1C4O75897 302 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 PSMG1O95456 288 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 PTTG1O95997 202 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 CCNE2O96020 404 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 DHFRP00374 187 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 CST1P01037 141 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 TNNC2P02585 160 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 IFNA4P05014 189 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 SMIM6P0DI80 62 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 PPIAL4FP0DN26 164 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 PRPS2P11908 318 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 COX4I1P13073 169 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 ADRB3P13945 408 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 FOLR1P15328 257 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 CRISP2P16562 243 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 IGFBP3P17936 291 aaPredicted RBP1.65□□□□□ -2.15
CBX3-208ENST00000497498 PSMC3P17980 439 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 KITLGP21583 273 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 CMA1P23946 247 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 AK4P27144 223 aaPredicted RBP1.65□□□□□ -2.15
CBX3-208ENST00000497498 HOXA9P31269 272 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 RCVRNP35243 200 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 MAS1LP35410 378 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 FDFT1P37268 417 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 NPBWR2P48146 333 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 UBE2AP49459 152 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 SLC18A1P54219 525 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 HADHBP55084 474 aaKnown RBP1.65□□□□□ -2.15
CBX3-208ENST00000497498 CDH6P55285 790 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 DEFA1P59665 94 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 DEFA3P59666 94 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 AP1S1P61966 158 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 NUTF2P61970 127 aaKnown RBP1.65□□□□□ -2.15
CBX3-208ENST00000497498 YWHAEP62258 255 aaKnown RBP1.65□□□□□ -2.15
CBX3-208ENST00000497498 RPL23AP62750 156 aaKnown RBP1.65□□□□□ -2.15
CBX3-208ENST00000497498 RPS21P63220 83 aaKnown RBP1.65□□□□□ -2.15
CBX3-208ENST00000497498 SLC7A9P82251 487 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 CUL2Q13617 745 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 DOC2AQ14183 400 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 SMCO1Q147U7 214 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 POU6F1Q14863 301 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 KCNJ8Q15842 424 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 ZNF77Q15935 545 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 DGUOKQ16854 277 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 TMEM183BQ1AE95 376 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 ALKBH6Q3KRA9 238 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 HSP90AA4PQ58FG1 418 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 YIF1BQ5BJH7 314 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 PPM1LQ5SGD2 360 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 SAPCD1Q5SSQ6 148 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 RESP18Q5W5W9 173 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 LRRC66Q68CR7 880 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 DNAJC24Q6P3W2 148 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 CLEC18BQ6UXF7 455 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 IZUMO2Q6UXV1 221 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 OAFQ86UD1 273 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 LRRC6Q86X45 466 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 PLCZ1Q86YW0 608 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 TMEM183AQ8IXX5 376 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 MICU2Q8IYU8 434 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 STX19Q8N4C7 294 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 C12orf29Q8N999 325 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 SNX31Q8N9S9 440 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 SPATA4Q8NEY3 305 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 B3GNT7Q8NFL0 401 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 NPBQ8NG41 125 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 OR5T1Q8NG75 326 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 OR6Q1Q8NGQ2 317 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 OR1S2Q8NGQ3 325 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 OR2G3Q8NGZ4 309 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 CLHC1Q8NHS4 586 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 ZNF502Q8TBZ5 544 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 ACTRT1Q8TDG2 376 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 CXorf40AQ8TE69 158 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 KCTD4Q8WVF5 259 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 ASZ1Q8WWH4 475 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 FGF14Q92915 247 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 TAMM41Q96BW9 452 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 TLCD1Q96CP7 247 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 TM4SF19Q96DZ7 209 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 CMTM5Q96DZ9 223 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 RBMXL1Q96E39 390 aaKnown RBP1.65□□□□□ -2.15
CBX3-208ENST00000497498 CCDC126Q96EE4 140 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 ZBED3Q96IU2 234 aaPredicted RBP1.65□□□□□ -2.15
CBX3-208ENST00000497498 CNDP1Q96KN2 507 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 BMFQ96LC9 184 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 CNBD2Q96M20 576 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 ATP5SQ99766 215 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 ZNF717Q9BY31 904 aaPredicted RBP1.65□□□□□ -2.15
CBX3-208ENST00000497498 GPR61Q9BZJ8 451 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 SLC19A3Q9BZV2 496 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 CCDC90BQ9GZT6 254 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 SLC22A4Q9H015 551 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 PIGUQ9H490 435 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 GOLPH3Q9H4A6 298 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 METTL8Q9H825 291 aaKnown RBP1.65□□□□□ -2.15
CBX3-208ENST00000497498 EFCAB1Q9HAE3 211 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 TM9SF3Q9HD45 589 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms