RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 GPER1Q99527 375 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 NAA50Q9GZZ1 169 aaKnown RBP16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 LIME1Q9H400 295 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 CHODLQ9H9P2 273 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 NPTNQ9Y639 398 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 SPG11Q96JI7 2443 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 A0A0G2JK05 382 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 DPPA5A6NC42 116 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 RP2O75695 350 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 KDM4BO94953 1096 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 BPNT1O95861 308 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 GRPP07492 148 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 IRF2P14316 349 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 DAOP14920 347 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 GIFP27352 417 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 CDKN1AP38936 164 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 VBP1P61758 197 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 MPPED2Q15777 294 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 CDH24Q86UP0 819 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 DVL3Q92997 716 aaPredicted RBP16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 SLC25A46Q96AG3 418 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 C12orf43Q96C57 262 aaKnown RBP16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 GFI1Q99684 422 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 NRIP2Q9BQI9 281 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 CNTD2Q9H8S5 307 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 HES4Q9HCC6 221 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 TMEM106BQ9NUM4 274 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 AK6Q9Y3D8 172 aaKnown RBP16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 UTP20O75691 2785 aaKnown RBP16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 UNC79Q9P2D8 2635 aa16.65■□□□□ 0.26
SCAMP3-209ENST00000497470 H3BMQ9 156 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 TMEM178BH3BS89 294 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 CDIPTO14735 213 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 CDRT1O95170 752 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 HTR2CP28335 458 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 PMELP40967 661 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 NCS1P62166 190 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM189A2Q15884 450 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 NHLRC3Q5JS37 347 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 DNM1P46Q6ZS02 220 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 MOGAT3Q86VF5 341 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 JAGN1Q8N5M9 183 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 OR51F2Q8NH61 342 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 NPRL2Q8WTW4 380 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 SLC25A28Q96A46 364 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 PTX4Q96A99 478 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 DCSTAMPQ9H295 470 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 C1orf123Q9NWV4 160 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 STEAP1Q9UHE8 339 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 DCHS2Q6V1P9 2916 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 TANC2Q9HCD6 1990 aa16.64■□□□□ 0.25
SCAMP3-209ENST00000497470 CACNA1DQ01668 2161 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 A6NLC8 198 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 H3BUI4 141 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 IGHV4-39P01824 125 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 MUC1P15941 1255 aaPredicted RBP16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 RPS19P39019 145 aaKnown RBP16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 ATP5J2P56134 94 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 PRAMEF6Q5VXH4 476 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 TEX36Q5VZQ5 186 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 SFXN4Q6P4A7 337 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 SLC25A26Q70HW3 274 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 OR2W3Q7Z3T1 314 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 ANGPTL5Q86XS5 388 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 TNFAIP8L1Q8WVP5 186 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 CEP19Q96LK0 163 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 S100A13Q99584 98 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 DNTTIP1Q9H147 329 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 METTL9Q9H1A3 318 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 RNF167Q9H6Y7 350 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 PLEKHA6Q9Y2H5 1048 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 MRPS28Q9Y2Q9 187 aaKnown RBP16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 AKAP6Q13023 2319 aa16.63■□□□□ 0.25
SCAMP3-209ENST00000497470 USF3Q68DE3 2245 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 CHD3Q12873 2000 aaKnown RBP16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 TRAPPC2LH3BP13 241 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 NDUFA2O43678 99 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 TMEM225BP0DP42 221 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 CALCBP10092 127 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 SERPINB10P48595 397 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 RORCP51449 518 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 LSM3P62310 102 aaKnown RBP16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 KCNJ8Q15842 424 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 DGUOKQ16854 277 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 SPRNQ5BIV9 151 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 PEG10Q86TG7 708 aaKnown RBP16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 NR2C2APQ86WQ0 139 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 GCSAMQ8N6F7 178 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 OR51T1Q8NGJ9 327 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 ACOT12Q8WYK0 555 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 C1orf147Q96MC9 270 aaPredicted RBP16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 CMTM3Q96MX0 182 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 PLGRKTQ9HBL7 147 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 MTCH1Q9NZJ7 389 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 ABRACLQ9P1F3 81 aa16.62■□□□□ 0.25
SCAMP3-209ENST00000497470 CLDN25C9JDP6 229 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 AKR7A2O43488 359 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 PDLIM4P50479 330 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 RAB11BQ15907 218 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 DMRTC1Q5HYR2 192 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms