RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 SETD9Q8NE22 299 aa11.9□□□□□ -0.5
SCAP-213ENST00000494938 GGHQ92820 318 aa11.9□□□□□ -0.5
SCAP-213ENST00000494938 GAFA1Q96PS6 74 aa11.9□□□□□ -0.5
SCAP-213ENST00000494938 MYCBPQ99417 103 aaPredicted RBP11.9□□□□□ -0.5
SCAP-213ENST00000494938 MRI1Q9BV20 369 aa11.9□□□□□ -0.5
SCAP-213ENST00000494938 CHST5Q9GZS9 411 aa11.9□□□□□ -0.5
SCAP-213ENST00000494938 DNTTIP1Q9H147 329 aa11.9□□□□□ -0.5
SCAP-213ENST00000494938 OCEL1Q9H607 264 aa11.9□□□□□ -0.5
SCAP-213ENST00000494938 RASL12Q9NYN1 266 aa11.9□□□□□ -0.5
SCAP-213ENST00000494938 NLKQ9UBE8 527 aa11.9□□□□□ -0.5
SCAP-213ENST00000494938 DNAJB11Q9UBS4 358 aa11.9□□□□□ -0.5
SCAP-213ENST00000494938 CLEC2DQ9UHP7 191 aa11.9□□□□□ -0.5
SCAP-213ENST00000494938 ZNF222Q9UK12 451 aa11.9□□□□□ -0.5
SCAP-213ENST00000494938 SLC7A11Q9UPY5 501 aa11.9□□□□□ -0.5
SCAP-213ENST00000494938 FAM230AA0A1W2PPH8 454 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 OR2AT4A6NND4 320 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 ENSAO43768 121 aaKnown RBP11.89□□□□□ -0.51
SCAP-213ENST00000494938 ZFPL1O95159 310 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 ECDO95905 644 aaPredicted RBP11.89□□□□□ -0.51
SCAP-213ENST00000494938 SERPINA3P01011 423 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 SELLP14151 372 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 FUT6P51993 359 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 GTF2A1P52655 376 aaPredicted RBP11.89□□□□□ -0.51
SCAP-213ENST00000494938 GBX2P52951 348 aaPredicted RBP11.89□□□□□ -0.51
SCAP-213ENST00000494938 ERVK11-1P61568 191 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 DGUOKQ16854 277 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 KRTAP24-1Q3LI83 254 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 ACP7Q6ZNF0 438 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 SLC36A1Q7Z2H8 476 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 LY6G5BQ8NDX9 201 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 TRMT10AQ8TBZ6 339 aaKnown RBP11.89□□□□□ -0.51
SCAP-213ENST00000494938 PP6455Q8WZ26 134 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 TMIGD2Q96BF3 282 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 UPRTQ96BW1 309 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 NRIP2Q9BQI9 281 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 PKIBQ9C010 78 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 PLEKHA1Q9HB21 404 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 NUP50Q9UKX7 468 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 HHLA2Q9UM44 414 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 DIMT1Q9UNQ2 313 aaKnown RBP11.89□□□□□ -0.51
SCAP-213ENST00000494938 MAB21L2Q9Y586 359 aa11.89□□□□□ -0.51
SCAP-213ENST00000494938 RNF212BA8MTL3 300 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 SIGLEC5O15389 551 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 NDUFB3O43676 98 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 TCF21O43680 179 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 GATBO75879 557 aaKnown RBP11.88□□□□□ -0.51
SCAP-213ENST00000494938 VENTXO95231 258 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 LIPFP07098 398 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 IGHV4-38-2P0DP08 117 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 MMP9P14780 707 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 ATF1P18846 271 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 FGF12P61328 243 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 IL24Q13007 206 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 MRPL28Q13084 256 aaKnown RBP11.88□□□□□ -0.51
SCAP-213ENST00000494938 IKZF1Q13422 519 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 OR2G6Q5TZ20 316 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 UTS2BQ765I0 119 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 C8orf59Q8N0T1 100 aaPredicted RBP11.88□□□□□ -0.51
SCAP-213ENST00000494938 BCL6BQ8N143 479 aaPredicted RBP11.88□□□□□ -0.51
SCAP-213ENST00000494938 CD177Q8N6Q3 437 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 ZNF676Q8N7Q3 588 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 NPRL2Q8WTW4 380 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 C22orf15Q8WYQ4 148 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 TMEM158Q8WZ71 300 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 ST8SIA4Q92187 359 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 TMEM80Q96HE8 168 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 MED30Q96HR3 178 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 PDCD1LG2Q9BQ51 273 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 CNTD2Q9H8S5 307 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 HES4Q9HCC6 221 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 PLCXD1Q9NUJ7 323 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 MTCH1Q9NZJ7 389 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 ZNF69Q9UC07 566 aa11.88□□□□□ -0.51
SCAP-213ENST00000494938 RPUSD1Q9UJJ7 312 aaKnown RBP11.88□□□□□ -0.51
SCAP-213ENST00000494938 CAB39Q9Y376 341 aaPredicted RBP11.88□□□□□ -0.51
SCAP-213ENST00000494938 SOX21Q9Y651 276 aaPredicted RBP11.88□□□□□ -0.51
SCAP-213ENST00000494938 SIRT4Q9Y6E7 314 aaPredicted RBP11.88□□□□□ -0.51
SCAP-213ENST00000494938 A0A0A6YYJ9 748 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 IRGMA1A4Y4 181 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 RFPL4AA6NLU0 287 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 ZNF879B4DU55 563 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 RFPL4AL1F8VTS6 287 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 F8VVB4 439 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 F8VWA3 439 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 PRDX2P32119 198 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 GABRA2P47869 451 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 SCGB2A2Q13296 93 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 XAF1Q6GPH4 301 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 USP43Q70EL4 1123 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 RNF144BQ7Z419 303 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 BATF2Q8N1L9 274 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 PNLDC1Q8NA58 520 aaKnown RBP11.87□□□□□ -0.51
SCAP-213ENST00000494938 ZNF485Q8NCK3 441 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 DNAAF1Q8NEP3 725 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 RPS4Y2Q8TD47 263 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 SDSLQ96GA7 329 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 SLC6A7Q99884 636 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 BABAM2Q9NXR7 383 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 PSORS1C1Q9UIG5 152 aa11.87□□□□□ -0.51
SCAP-213ENST00000494938 POLDIP2Q9Y2S7 368 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms