RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 RASL12Q9NYN1 266 aa12.62□□□□□ -0.39
ACTB-213ENST00000493945 DNAJB11Q9UBS4 358 aa12.62□□□□□ -0.39
ACTB-213ENST00000493945 USF3Q68DE3 2245 aa12.62□□□□□ -0.39
ACTB-213ENST00000493945 CHD3Q12873 2000 aaKnown RBP12.62□□□□□ -0.39
ACTB-213ENST00000493945 LOC100289279A0A1B0GTE1 492 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 NOTOA8MTQ0 251 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 ZNF701M0R085 212 aaPredicted RBP12.61□□□□□ -0.39
ACTB-213ENST00000493945 SSX4O60224 188 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 CDC14BO60729 498 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 PLATP00750 562 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 HEXAP06865 529 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 ACAA1P09110 424 aaPredicted RBP12.61□□□□□ -0.39
ACTB-213ENST00000493945 GLRA1P23415 457 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 HTR2CP28335 458 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 SOX6P35712 828 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 SERPINB10P48595 397 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 KRTAP10-9P60411 292 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 LSM3P62310 102 aaKnown RBP12.61□□□□□ -0.39
ACTB-213ENST00000493945 PDZK1IP1Q13113 114 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 RAB11BQ15907 218 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 SLC25A26Q70HW3 274 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 FAM90A1Q86YD7 464 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 OR51F2Q8NH61 342 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 LRRC29Q8WV35 223 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 FAM168AQ92567 244 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 AP3S1Q92572 193 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 NRGNQ92686 78 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 RPL3LQ92901 407 aaKnown RBP12.61□□□□□ -0.39
ACTB-213ENST00000493945 CEP19Q96LK0 163 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 CENPOQ9BU64 300 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 LIME1Q9H400 295 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 MRPS28Q9Y2Q9 187 aaKnown RBP12.61□□□□□ -0.39
ACTB-213ENST00000493945 UNC79Q9P2D8 2635 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 DCHS2Q6V1P9 2916 aa12.61□□□□□ -0.39
ACTB-213ENST00000493945 ABCA12Q86UK0 2595 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 TRAV38-1A0A0B4J264 116 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 SLC17A2O00624 439 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 KDM4BO94953 1096 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 NXPH2O95156 264 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 CDRT1O95170 752 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 IGHV4-39P01824 125 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 MUC1P15941 1255 aaPredicted RBP12.6□□□□□ -0.39
ACTB-213ENST00000493945 PTGFRP43088 359 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 GPR6P46095 362 aaPredicted RBP12.6□□□□□ -0.39
ACTB-213ENST00000493945 MICBQ29980 383 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 SHEQ5VZ18 495 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 PRSS57Q6UWY2 283 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 WDR82Q6UXN9 313 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 LRRTM1Q86UE6 522 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 POC1AQ8NBT0 407 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 OR5D18Q8NGL1 313 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 RFT1Q96AA3 541 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 C12orf43Q96C57 262 aaKnown RBP12.6□□□□□ -0.39
ACTB-213ENST00000493945 ORAI1Q96D31 301 aa12.6□□□□□ -0.39
ACTB-213ENST00000493945 RSL24D1Q9UHA3 163 aaKnown RBP12.6□□□□□ -0.39
ACTB-213ENST00000493945 AK6Q9Y3D8 172 aaKnown RBP12.6□□□□□ -0.39
ACTB-213ENST00000493945 NAV2Q8IVL1 2488 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 PPIAL4EA0A075B759 164 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 IGHV3-64DA0A0J9YX35 117 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 NKX6-3A6NJ46 265 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 PPIAL4DF5H284 164 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 AIPO00170 330 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 PPIHO43447 177 aaKnown RBP12.59□□□□□ -0.39
ACTB-213ENST00000493945 NDUFA2O43678 99 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 NOS1APO75052 506 aaPredicted RBP12.59□□□□□ -0.39
ACTB-213ENST00000493945 FSTL3O95633 263 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 BPNT1O95861 308 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 PGA5P0DJD9 388 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 PPIAL4FP0DN26 164 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 CPT2P23786 658 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 SDC2P34741 201 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 SCAND1P57086 179 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 VBP1P61758 197 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 MPPED2Q15777 294 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 ASPHD2Q6ICH7 369 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 WDR86Q86TI4 376 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 SPICQ8N5J4 248 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 TBC1D15Q8TC07 691 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 EMG1Q92979 244 aaKnown RBP12.59□□□□□ -0.39
ACTB-213ENST00000493945 ISOC1Q96CN7 298 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 MRPS24Q96EL2 167 aaKnown RBP12.59□□□□□ -0.39
ACTB-213ENST00000493945 SPACA5Q96QH8 159 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 IL36GQ9NZH8 169 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 STEAP1Q9UHE8 339 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 ING4Q9UNL4 249 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 PPIAL4AQ9Y536 164 aa12.59□□□□□ -0.39
ACTB-213ENST00000493945 ISPDA4D126 451 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 IFITM5A6NNB3 132 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 SRRM5B3KS81 715 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 TMEM178BH3BS89 294 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 GTF2F2P13984 249 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 ARSBP15848 533 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 SLC25A16P16260 332 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 CFPP27918 469 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 MDH2P40926 338 aaKnown RBP12.58□□□□□ -0.4
ACTB-213ENST00000493945 ZP1P60852 638 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 BTG1P62324 171 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 MXD1Q05195 221 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 CTF1Q16619 201 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 DGUOKQ16854 277 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms