RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 OR52N4Q8NGI2 321 aa15□□□□□ -0.01
PDLIM7-208ENST00000493815 CLDND2Q8NHS1 167 aa15□□□□□ -0.01
PDLIM7-208ENST00000493815 GAL3ST1Q99999 423 aa15□□□□□ -0.01
PDLIM7-208ENST00000493815 NDUFB11Q9NX14 153 aa15□□□□□ -0.01
PDLIM7-208ENST00000493815 PPIAL4AQ9Y536 164 aa15□□□□□ -0.01
PDLIM7-208ENST00000493815 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.99□□□□□ -0.01
PDLIM7-208ENST00000493815 SPRY1O43609 319 aaPredicted RBP14.99□□□□□ -0.01
PDLIM7-208ENST00000493815 SC5DO75845 299 aa14.99□□□□□ -0.01
PDLIM7-208ENST00000493815 IGFBP3P17936 291 aaPredicted RBP14.99□□□□□ -0.01
PDLIM7-208ENST00000493815 GABRA5P31644 462 aa14.99□□□□□ -0.01
PDLIM7-208ENST00000493815 ATP1B3P54709 279 aa14.99□□□□□ -0.01
PDLIM7-208ENST00000493815 LHFPL2Q6ZUX7 228 aa14.99□□□□□ -0.01
PDLIM7-208ENST00000493815 SLC25A26Q70HW3 274 aa14.99□□□□□ -0.01
PDLIM7-208ENST00000493815 LRRC28Q86X40 367 aaPredicted RBP14.99□□□□□ -0.01
PDLIM7-208ENST00000493815 MUL1Q969V5 352 aa14.99□□□□□ -0.01
PDLIM7-208ENST00000493815 TMEM165Q9HC07 324 aa14.99□□□□□ -0.01
PDLIM7-208ENST00000493815 CKLFQ9UBR5 152 aa14.99□□□□□ -0.01
PDLIM7-208ENST00000493815 CCRL2O00421 344 aa14.98□□□□□ -0.01
PDLIM7-208ENST00000493815 RGS9O75916 674 aaPredicted RBP14.98□□□□□ -0.01
PDLIM7-208ENST00000493815 TFF1P04155 84 aa14.98□□□□□ -0.01
PDLIM7-208ENST00000493815 MAS1P04201 325 aa14.98□□□□□ -0.01
PDLIM7-208ENST00000493815 SMIM18P0DKX4 95 aa14.98□□□□□ -0.01
PDLIM7-208ENST00000493815 MAPK3P27361 379 aaPredicted RBP14.98□□□□□ -0.01
PDLIM7-208ENST00000493815 CFHR2P36980 270 aa14.98□□□□□ -0.01
PDLIM7-208ENST00000493815 KISS1Q15726 138 aa14.98□□□□□ -0.01
PDLIM7-208ENST00000493815 SYT6Q5T7P8 510 aaPredicted RBP14.98□□□□□ -0.01
PDLIM7-208ENST00000493815 OR5T2Q8NGG2 359 aa14.98□□□□□ -0.01
PDLIM7-208ENST00000493815 SLAMF9Q96A28 289 aa14.98□□□□□ -0.01
PDLIM7-208ENST00000493815 SNTG1Q9NSN8 517 aa14.98□□□□□ -0.01
PDLIM7-208ENST00000493815 MED13LQ71F56 2210 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 SRRM5B3KS81 715 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 F8VVB4 439 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 F8VWA3 439 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 GABRPO00591 440 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 ANGPTL7O43827 346 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 ALX3O95076 343 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 MPZP25189 248 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 MDH2P40926 338 aaKnown RBP14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 FAM90A1Q86YD7 464 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 ZNF671Q8TAW3 534 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 COX4I2Q96KJ9 171 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 TMEM246Q9BRR3 403 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 TMEM138Q9NPI0 162 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 MTCH1Q9NZJ7 389 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 OOEPA6NGQ2 149 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 LGALS8O00214 317 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 MAGEB3O15480 346 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 GYPAP02724 150 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 UCHL1P09936 223 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 CALCBP10092 127 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 CD99P14209 185 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 FSTP19883 344 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 BDKRB2P30411 391 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 LOXL1Q08397 574 aaPredicted RBP14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 IL24Q13007 206 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 PDZK1IP1Q13113 114 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 TRAM1Q15629 374 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 DDI2Q5TDH0 399 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 OR10Z1Q8NGY1 313 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 GPER1Q99527 375 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 SMR3AQ99954 134 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 TMUB1Q9BVT8 246 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 PKIBQ9C010 78 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 NEK6Q9HC98 313 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 POLDIP2Q9Y2S7 368 aa14.97□□□□□ -0.01
PDLIM7-208ENST00000493815 CR1P17927 2039 aa14.96□□□□□ -0.01
PDLIM7-208ENST00000493815 TRIM64CA6NLI5 447 aa14.96□□□□□ -0.01
PDLIM7-208ENST00000493815 PGA5P0DJD9 388 aa14.96□□□□□ -0.01
PDLIM7-208ENST00000493815 GLRA1P23415 457 aa14.96□□□□□ -0.01
PDLIM7-208ENST00000493815 PSMA1P25786 263 aaKnown RBP14.96□□□□□ -0.01
PDLIM7-208ENST00000493815 LMO4P61968 165 aa14.96□□□□□ -0.01
PDLIM7-208ENST00000493815 ZNF404Q494X3 552 aa14.96□□□□□ -0.01
PDLIM7-208ENST00000493815 HSD17B12Q53GQ0 312 aa14.96□□□□□ -0.01
PDLIM7-208ENST00000493815 LYPD2Q6UXB3 125 aa14.96□□□□□ -0.01
PDLIM7-208ENST00000493815 C18orf12Q96KH6 178 aa14.96□□□□□ -0.01
PDLIM7-208ENST00000493815 VCX3AQ9NNX9 186 aa14.96□□□□□ -0.01
PDLIM7-208ENST00000493815 DNAJB11Q9UBS4 358 aa14.96□□□□□ -0.01
PDLIM7-208ENST00000493815 PCDHB10Q9UN67 800 aa14.96□□□□□ -0.01
PDLIM7-208ENST00000493815 FOXJ3Q9UPW0 622 aa14.96□□□□□ -0.01
PDLIM7-208ENST00000493815 IGKV1-12A0A0C4DH73 117 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 CEACAM18A8MTB9 384 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 GPX5O75715 221 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 IGKV1D-12P01611 117 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 ADRA2CP18825 462 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 CALRP27797 417 aaKnown RBP14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 OR3A4PP47883 348 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 NPBWR2P48146 333 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 ZP1P60852 638 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 MICBQ29980 383 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 C1QL2Q7Z5L3 287 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 POC1AQ8NBT0 407 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 OR51F2Q8NH61 342 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 THRSPQ92748 146 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 NRIP2Q9BQI9 281 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 FAM192AQ9GZU8 254 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 ZNF665Q9H7R5 613 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 TCF7L1Q9HCS4 588 aa14.95□□□□□ -0.02
PDLIM7-208ENST00000493815 TRAV38-1A0A0B4J264 116 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 A0A1B0GW55 424 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 NXPH2O95156 264 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms