RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 NCS1P62166 190 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 HOXA4Q00056 320 aaPredicted RBP14.51□□□□□ -0.09
LIME1-208ENST00000493265 MXD1Q05195 221 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 BLMHQ13867 455 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 HFEQ30201 348 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 SLC16A12Q6ZSM3 486 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 ANKRD13BQ86YJ7 626 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 WFDC11Q8NEX6 87 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 OR11L1Q8NGX0 322 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 RDH5Q92781 318 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 SMR3AQ99954 134 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 METTL17Q9H7H0 456 aaPredicted RBP14.51□□□□□ -0.09
LIME1-208ENST00000493265 BEX4Q9NWD9 120 aaPredicted RBP14.51□□□□□ -0.09
LIME1-208ENST00000493265 SYNGR1O43759 233 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 ANGPTL7O43827 346 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 ALX3O95076 343 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 TMEM225BP0DP42 221 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 IRF2P14316 349 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 SDC2P34741 201 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 GATA4P43694 442 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 GDPGP1Q6ZNW5 385 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 SLC25A26Q70HW3 274 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 C11orf53Q8IXP5 236 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 ZNF525Q8N782 197 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 LRRC29Q8WV35 223 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 TNFAIP8L1Q8WVP5 186 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 AQP3Q92482 292 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 SLAMF9Q96A28 289 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 ZNF488Q96MN9 340 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 GSX2Q9BZM3 304 aa14.5□□□□□ -0.09
LIME1-208ENST00000493265 ELL3Q9HB65 397 aaPredicted RBP14.5□□□□□ -0.09
LIME1-208ENST00000493265 BARX1Q9HBU1 254 aaPredicted RBP14.5□□□□□ -0.09
LIME1-208ENST00000493265 TRAV1-2A0A0B4J238 106 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 MEGF11A6BM72 1044 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 J3QT63 122 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 PDCD5O14737 125 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 NOL3O60936 208 aaKnown RBP14.49□□□□□ -0.09
LIME1-208ENST00000493265 CDRT1O95170 752 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 ZNF205O95201 554 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 ALDOBP05062 364 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 CLEC2LP0C7M8 214 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 OR3A4PP47883 348 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 OR10A3P58181 314 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 FAM76BQ5HYJ3 339 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 GLT8D1Q68CQ7 371 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 WDR82Q6UXN9 313 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 NKAIN3Q8N8D7 197 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 PNLDC1Q8NA58 520 aaKnown RBP14.49□□□□□ -0.09
LIME1-208ENST00000493265 C19orf18Q8NEA5 215 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 CPNE2Q96FN4 548 aaPredicted RBP14.49□□□□□ -0.09
LIME1-208ENST00000493265 GFI1Q99684 422 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 TMEM106BQ9NUM4 274 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 RNF7Q9UBF6 113 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 ING4Q9UNL4 249 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 USF3Q68DE3 2245 aa14.49□□□□□ -0.09
LIME1-208ENST00000493265 CHD3Q12873 2000 aaKnown RBP14.48□□□□□ -0.09
LIME1-208ENST00000493265 TRIM64BA6NI03 449 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 LRRC30A6NM36 301 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 AKR7A2O43488 359 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 GABARAPO95166 117 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 PTBP3O95758 552 aaKnown RBP14.48□□□□□ -0.09
LIME1-208ENST00000493265 CYB5AP00167 134 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 CALCBP10092 127 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 RAB3BP20337 219 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 CD80P33681 288 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 SERPINB10P48595 397 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 MTNR1BP49286 362 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 CAV3P56539 151 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 PDZK1IP1Q13113 114 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 FAM201AQ5SY85 155 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 CRIP3Q6Q6R5 217 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 BIVMQ86UB2 503 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 OR51F2Q8NH61 342 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 ZNF671Q8TAW3 534 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 ERGIC1Q969X5 290 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 TLNRD1Q9H1K6 362 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 PLGRKTQ9HBL7 147 aa14.48□□□□□ -0.09
LIME1-208ENST00000493265 NSD1Q96L73 2696 aaPredicted RBP14.48□□□□□ -0.09
LIME1-208ENST00000493265 DYSFO75923 2080 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 WNT9BO14905 357 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 PPIHO43447 177 aaKnown RBP14.47□□□□□ -0.09
LIME1-208ENST00000493265 PAX1P15863 534 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 EGR1P18146 543 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 CTF1Q16619 201 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 AVPI1Q5T686 147 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 HES5Q5TA89 166 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 MKXQ8IYA7 352 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 Q8TCH9 128 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 HPS1Q92902 700 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 S100A13Q99584 98 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 PKIBQ9C010 78 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 CNTD2Q9H8S5 307 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 MRPS28Q9Y2Q9 187 aaKnown RBP14.47□□□□□ -0.09
LIME1-208ENST00000493265 POLDIP2Q9Y2S7 368 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 CEPT1Q9Y6K0 416 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 V9GY05 133 aa14.47□□□□□ -0.09
LIME1-208ENST00000493265 IGHV3OR15-7A0A075B7D8 119 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 CLDN25C9JDP6 229 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 TRAPPC2LH3BP13 241 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 TMEM178BH3BS89 294 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms