RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 RABL2AQ9UBK7 228 aaPredicted RBP8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 ZNF391Q9UJN7 358 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 PURGQ9UJV8 347 aaKnown RBP8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 RABL2BQ9UNT1 228 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 TRAV8-7A0A075B6U6 113 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 A0A1B0GVI7 797 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 A0A1B0GWJ7 208 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 ANKRD61A6NGH8 418 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 A6NIN4 97 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 DHRS7CA6NNS2 312 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 PDCD5O14737 125 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 WNT9BO14905 357 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 RGS5O15539 181 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 APOA1P02647 267 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 MSMBP08118 114 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 OCM2P0CE71 109 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 RAC2P15153 192 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 FAHP16930 419 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 IGFBP3P17936 291 aaPredicted RBP8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 FSTP19883 344 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 SOX2P48431 317 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 PSMD7P51665 324 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 LMO4P61968 165 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 TNFAIP6P98066 277 aaPredicted RBP8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 IL17RELQ6ZVW7 336 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 PGAP1Q75T13 922 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 PEG10Q86TG7 708 aaKnown RBP8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 PARP16Q8N5Y8 322 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 OR56B2PQ8NGI1 322 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 OR51F2Q8NH61 342 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 SPATA3Q8NHX4 192 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 TMEM158Q8WZ71 300 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 CCL17Q92583 94 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 TMEM186Q96B77 213 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 RAB39BQ96DA2 213 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 GFI1Q99684 422 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 FGF23Q9GZV9 251 aaPredicted RBP8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 SLITRK2Q9H156 845 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 OPA3Q9H6K4 179 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 ZNF665Q9H7R5 613 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 MSL2Q9HCI7 577 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 NOX4Q9NPH5 578 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 TREM2Q9NZC2 230 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 WIPI2Q9Y4P8 454 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 ATRQ13535 2644 aa8.91□□□□□ -0.98
SCAMP4-208ENST00000489554 MALRD1Q5VYJ5 2156 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 TRAV1-2A0A0B4J238 106 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 TRAV20A0A0B4J274 112 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 IGKV1-9A0A0C4DH69 117 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 A0A1W2PPK0 400 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 CD300LBA8K4G0 201 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 IQCF6A8MYZ5 107 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 FAM157AC9JC47 383 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 ADRA2CP18825 462 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 TNFRSF1AP19438 455 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 MALLQ13021 153 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 TRIM16LQ309B1 348 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 AVPI1Q5T686 147 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 OR2T2Q6IF00 324 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 RNF144BQ7Z419 303 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 CEACAM19Q7Z692 300 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 LRRTM1Q86UE6 522 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 CCDC190Q86UF4 302 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 NR2C2APQ86WQ0 139 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 LYPD6Q86Y78 171 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 OR5AS1Q8N127 324 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 MFSD4AQ8N468 514 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 CCDC54Q8NEL0 328 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 OR13C3Q8NGS6 347 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 CHPT1Q8WUD6 406 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 TSEN15Q8WW01 171 aaKnown RBP8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 TMEM106AQ96A25 262 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 FGGYQ96C11 551 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 HIF1ANQ9NWT6 349 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 IL19Q9UHD0 177 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 DHDHQ9UQ10 334 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 RHBDD3Q9Y3P4 386 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 CACNG2Q9Y698 323 aa8.9□□□□□ -0.98
SCAMP4-208ENST00000489554 A0A0G2JK05 382 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 RNF212BA8MTL3 300 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 PHF1O43189 567 aaPredicted RBP8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 UPK1BO75841 260 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 CD37P11049 281 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 SELEP16581 610 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 SRP14P37108 136 aaKnown RBP8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 DDOSTP39656 456 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 MAP2K3P46734 347 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 HNRNPA0Q13151 305 aaKnown RBP8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 UBE2V2Q15819 145 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 CEP78Q5JTW2 689 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 ZBTB37Q5TC79 503 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 Q6ZNX1 250 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 Q6ZR03 302 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 MRPL21Q7Z2W9 205 aaKnown RBP8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 COMMD2Q86X83 199 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 TEX29Q8N6K0 151 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 GDPD1Q8N9F7 314 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 SEMA6DQ8NFY4 1073 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 OR2Z1Q8NG97 314 aa8.89□□□□□ -0.99
SCAMP4-208ENST00000489554 OR51A2Q8NGJ7 313 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms