RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 IMPAD1Q9NX62 359 aa11.52□□□□□ -0.57
VTI1A-206ENST00000489142 MAB21L2Q9Y586 359 aa11.52□□□□□ -0.57
VTI1A-206ENST00000489142 ORC6Q9Y5N6 252 aa11.52□□□□□ -0.57
VTI1A-206ENST00000489142 FAM230AA0A1W2PPH8 454 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 PQLC2LA1A4F0 135 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 RFPL4AA6NLU0 287 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 RFPL4AL1F8VTS6 287 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 RNASEK-C17orf49H0YIS7 233 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 J3QT63 122 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 KIR3DL2P43630 455 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 BPIFB3P59826 476 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 TMEM42Q69YG0 159 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 CALHM1Q8IU99 346 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 CMTM4Q8IZR5 234 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 RDH10Q8IZV5 341 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 FAM185AQ8N0U4 392 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 CBR4Q8N4T8 237 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 POC1AQ8NBT0 407 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 C8orf46Q8TAG6 207 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 RNFT2Q96EX2 444 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 PLEKHA1Q9HB21 404 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 NOX4Q9NPH5 578 aa11.51□□□□□ -0.57
VTI1A-206ENST00000489142 LOC107986453A0A1B0GWG9 222 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 ANKRD61A6NGH8 418 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 DLGAP1O14490 977 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 SYT7O43581 403 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 NXPH2O95156 264 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 IGHV4-59P01825 116 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 PGA5P0DJD9 388 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 CCL1P22362 96 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 SMIM21Q3B7S5 101 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 C11orf91Q3C1V1 193 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 FAM220AQ7Z4H9 259 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 KIR3DL3Q8N743 410 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 OR4M1Q8NGD0 313 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 RFKQ969G6 155 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 RNF166Q96A37 237 aaPredicted RBP11.5□□□□□ -0.57
VTI1A-206ENST00000489142 MBOAT4Q96T53 435 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 ZNF747Q9BV97 191 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 C19orf12Q9NSK7 152 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 OR14J1Q9UGF5 321 aa11.5□□□□□ -0.57
VTI1A-206ENST00000489142 IGKV1-27A0A075B6S5 117 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 GPR37O15354 613 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 SULT1C4O75897 302 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 ALDH3A2P51648 485 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 CAV3P56539 151 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 RELBQ01201 579 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 SRSF4Q08170 494 aaKnown RBP11.49□□□□□ -0.57
VTI1A-206ENST00000489142 UBE2V2Q15819 145 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 ZFP1Q6P2D0 407 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 Q6ZSR3 168 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 ZNF573Q86YE8 665 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 TNFRSF14Q92956 283 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 SDSLQ96GA7 329 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 HRASLS5Q96KN8 279 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 RASL12Q9NYN1 266 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 USE1Q9NZ43 259 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 FAM96BQ9Y3D0 163 aa11.49□□□□□ -0.57
VTI1A-206ENST00000489142 MEX3AA1L020 520 aaKnown RBP11.48□□□□□ -0.57
VTI1A-206ENST00000489142 F8VVB4 439 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 F8VWA3 439 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 NPFFO15130 113 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 CRYBA1P05813 215 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 PRDX2P32119 198 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 IER3P46695 156 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 OR12D2P58182 307 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 ERVFRD-1P60508 538 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 ISL1P61371 349 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 SSMEM1Q8WWF3 244 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 ITFG2Q969R8 447 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 SLAMF9Q96A28 289 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 SLC29A1Q99808 456 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 NRIP2Q9BQI9 281 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 ADI1Q9BV57 179 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 C1RLQ9NZP8 487 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.48□□□□□ -0.57
VTI1A-206ENST00000489142 POLDIP2Q9Y2S7 368 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 GMPPBQ9Y5P6 360 aa11.48□□□□□ -0.57
VTI1A-206ENST00000489142 DAPL1A0PJW8 107 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 MEIOCA2RUB1 952 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 DHRS7CA6NNS2 312 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 E9PQ18 207 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 H0YAE9 185 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 ANGPTL7O43827 346 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 GPR137BO60478 399 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 PIPP12273 146 aaPredicted RBP11.47□□□□□ -0.57
VTI1A-206ENST00000489142 EEF1B2P24534 225 aaKnown RBP11.47□□□□□ -0.57
VTI1A-206ENST00000489142 MPZP25189 248 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 PAX6P26367 422 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 SAA4P35542 130 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 RAG2P55895 527 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 NANOS3P60323 173 aaKnown RBP11.47□□□□□ -0.57
VTI1A-206ENST00000489142 SNRPGP62308 76 aaKnown RBP11.47□□□□□ -0.57
VTI1A-206ENST00000489142 TMED1Q13445 227 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 HCP5Q6MZN7 132 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 METAP1DQ6UB28 335 aaPredicted RBP11.47□□□□□ -0.57
VTI1A-206ENST00000489142 SHISA2Q6UWI4 295 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 OR2G2Q8NGZ5 317 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 OR10AC1Q8NH08 325 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 C17orf50Q8WW18 174 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms