RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 APH1BQ8WW43 257 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 PELI1Q96FA3 418 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 SLC6A7Q99884 636 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 PCGF1Q9BSM1 259 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 CHST5Q9GZS9 411 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 COMMD4Q9H0A8 199 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 CNTD2Q9H8S5 307 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 SMURF1Q9HCE7 757 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 HSPE1-MOB4S4R3N1 261 aa11.85□□□□□ -0.51
BRCA1-218ENST00000489037 TRIM77I1YAP6 450 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 CASQ2O14958 399 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-218ENST00000489037 WBP4O75554 376 aaKnown RBP11.84□□□□□ -0.51
BRCA1-218ENST00000489037 TOX4O94842 621 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 NXPH2O95156 264 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 CLIC3O95833 236 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 CYB5AP00167 134 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 MYL12AP19105 171 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 PRKACBP22694 351 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 DCKP27707 260 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 CAPGP40121 348 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 TGM4P49221 684 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 ATP1B3P54709 279 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 SRSF2Q01130 221 aaKnown RBP11.84□□□□□ -0.51
BRCA1-218ENST00000489037 KRTAP24-1Q3LI83 254 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 OGFRL1Q5TC84 451 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-218ENST00000489037 GPR157Q5UAW9 335 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 ZNF788Q6ZQV5 615 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 CMTM4Q8IZR5 234 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 C8orf59Q8N0T1 100 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-218ENST00000489037 OR13C3Q8NGS6 347 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 ANGPTL6Q8NI99 470 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 CNIH3Q8TBE1 160 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 C22orf15Q8WYQ4 148 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 H1FXQ92522 213 aaKnown RBP11.84□□□□□ -0.51
BRCA1-218ENST00000489037 DACT3Q96B18 629 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-218ENST00000489037 FGGYQ96C11 551 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 DMRTB1Q96MA1 342 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 C19orf24Q9BVV8 132 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 PKIBQ9C010 78 aa11.84□□□□□ -0.51
BRCA1-218ENST00000489037 FGF20Q9NP95 211 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-218ENST00000489037 SLC25A10Q9UBX3 287 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-218ENST00000489037 CUBNO60494 3623 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 TRAV40A0A0B4J280 105 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 TMEM212A6NML5 194 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 H0YAE9 185 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 SIGLEC5O15389 551 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 SYNGR1O43759 233 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 NOS1APO75052 506 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-218ENST00000489037 VENTXO95231 258 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 ACAA1P09110 424 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-218ENST00000489037 PGA5P0DJD9 388 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 PSG2P11465 335 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 NDUFB7P17568 137 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 RBP2P50120 134 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 CAPZA1P52907 286 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 BPIFB3P59826 476 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 HILS1P60008 231 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 NANOS3P60323 173 aaKnown RBP11.83□□□□□ -0.52
BRCA1-218ENST00000489037 ELF3P78545 371 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-218ENST00000489037 ADARB1P78563 741 aaKnown RBP11.83□□□□□ -0.52
BRCA1-218ENST00000489037 IL24Q13007 206 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 PDCD1Q15116 288 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 UBE2V2Q15819 145 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 SMN1Q16637 294 aaKnown RBP11.83□□□□□ -0.52
BRCA1-218ENST00000489037 KLF17Q5JT82 389 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-218ENST00000489037 ACP7Q6ZNF0 438 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 ANGPTL5Q86XS5 388 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 PHC2Q8IXK0 858 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 DNAAF1Q8NEP3 725 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 OR5AK2Q8NH90 309 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 ZFAND2BQ8WV99 257 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 WDFY2Q96P53 400 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 GAFA1Q96PS6 74 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 ISG20L2Q9H9L3 353 aaKnown RBP11.83□□□□□ -0.52
BRCA1-218ENST00000489037 ZNF69Q9UC07 566 aa11.83□□□□□ -0.52
BRCA1-218ENST00000489037 RPUSD1Q9UJJ7 312 aaKnown RBP11.83□□□□□ -0.52
BRCA1-218ENST00000489037 EXOSC1Q9Y3B2 195 aaKnown RBP11.83□□□□□ -0.52
BRCA1-218ENST00000489037 IGHV3OR16-10A0A075B7F0 116 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 TRBV2A0A0J9YWF9 115 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 A0A1B0GW55 424 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 ERICH4A6NGS2 130 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 RFPL4AA6NLU0 287 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 OR4C45A6NMZ5 311 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 RFPL4AL1F8VTS6 287 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 SLC1A7O00341 560 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 DUX4L2P0CJ85 424 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 DUX4L3P0CJ86 424 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 DUX4L4P0CJ87 422 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 DUX4L5P0CJ88 424 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 DUX4L6P0CJ89 424 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 DUX4L7P0CJ90 424 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 ATF1P18846 271 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 MPZP25189 248 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 CAV3P56539 151 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 ARF6P62330 175 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 SLC34A1Q06495 639 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 DUX4L9Q6RFH8 374 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-218ENST00000489037 UTS2BQ765I0 119 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 MKXQ8IYA7 352 aa11.82□□□□□ -0.52
BRCA1-218ENST00000489037 TMEM185AQ8NFB2 350 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms