RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 SLC17A4Q9Y2C5 497 aa2.4□□□□□ -2.03
SSR1-209ENST00000488834 YARS2Q9Y2Z4 477 aaKnown RBP2.4□□□□□ -2.03
SSR1-209ENST00000488834 SNX24Q9Y343 169 aa2.4□□□□□ -2.03
SSR1-209ENST00000488834 TSSC4Q9Y5U2 329 aaPredicted RBP2.4□□□□□ -2.03
SSR1-209ENST00000488834 ABCC6O95255 1503 aa2.4□□□□□ -2.03
SSR1-209ENST00000488834 ABCC5O15440 1437 aa2.4□□□□□ -2.03
SSR1-209ENST00000488834 PTPRKQ15262 1439 aa2.4□□□□□ -2.03
SSR1-209ENST00000488834 COL4A4P53420 1690 aaPredicted RBP2.4□□□□□ -2.03
SSR1-209ENST00000488834 SHPRHQ149N8 1683 aa2.4□□□□□ -2.03
SSR1-209ENST00000488834 MN1Q10571 1320 aaPredicted RBP2.4□□□□□ -2.03
SSR1-209ENST00000488834 SPHKAPQ2M3C7 1700 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 KNDC1Q76NI1 1749 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 ERVK-7P63135 1459 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 ZNF518AQ6AHZ1 1483 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 ADGRB3O60242 1522 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 ARAP3Q8WWN8 1544 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 IQGAP1P46940 1657 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 A0A0A6YYH2 397 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 A6NJ64 397 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 SLC22A20A6NK97 555 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 HACD1B0YJ81 288 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 CLDN25C9JDP6 229 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 C12orf77C9JDV5 145 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 KRTAP4-16G5E9R7 235 aaPredicted RBP2.39□□□□□ -2.03
SSR1-209ENST00000488834 KLRC4-KLRK1H3BQV0 150 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 PRMT5O14744 637 aaPredicted RBP2.39□□□□□ -2.03
SSR1-209ENST00000488834 TOX3O15405 576 aaPredicted RBP2.39□□□□□ -2.03
SSR1-209ENST00000488834 ADAP1O75689 374 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 WISP3O95389 354 aaPredicted RBP2.39□□□□□ -2.03
SSR1-209ENST00000488834 AHSA1O95433 338 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 CD160O95971 181 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 CCNE2O96020 404 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 SERPINA5P05154 406 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 FBP1P09467 338 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 SMIM6P0DI80 62 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 HSPD1P10809 573 aaKnown RBP2.39□□□□□ -2.03
SSR1-209ENST00000488834 PGAM1P18669 254 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 TEAD1P28347 426 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 CRABP1P29762 137 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 CD79BP40259 229 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 NMUP48645 174 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 GNG10P50151 68 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 ESRRGP62508 458 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 MGAT3Q09327 533 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 BNIP2Q12982 314 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 STX5Q13190 355 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 SLC39A6Q13433 755 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 EIF4EBP1Q13541 118 aaPredicted RBP2.39□□□□□ -2.03
SSR1-209ENST00000488834 KRR1Q13601 381 aaKnown RBP2.39□□□□□ -2.03
SSR1-209ENST00000488834 FLOT2Q14254 428 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 PSMD5Q16401 504 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 EXOC3L4Q17RC7 722 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 RPEL1Q2QD12 228 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 KLHL12Q53G59 568 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 OGFRL1Q5TC84 451 aaPredicted RBP2.39□□□□□ -2.03
SSR1-209ENST00000488834 FRMPD2BQ6IN97 320 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 FAM71E1Q6IPT2 247 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 SPESP1Q6UW49 350 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 NPSR1Q6W5P4 371 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 CERS6Q6ZMG9 384 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 C4orf33Q8N1A6 199 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.39□□□□□ -2.03
SSR1-209ENST00000488834 OR10G9Q8NGN4 311 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 OR1S2Q8NGQ3 325 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 OR2L8Q8NGY9 312 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 OR10J5Q8NHC4 309 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 LGALS14Q8TCE9 139 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 BAALCQ8WXS3 180 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 SMARCD2Q92925 531 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 C12orf43Q96C57 262 aaKnown RBP2.39□□□□□ -2.03
SSR1-209ENST00000488834 SGTBQ96EQ0 304 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 HSFY1Q96LI6 401 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 QKIQ96PU8 341 aaKnown RBP eCLIP2.39□□□□□ -2.031e-8■■□□□ 12
SSR1-209ENST00000488834 SERPINI1Q99574 410 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 UTP23Q9BRU9 249 aaKnown RBP2.39□□□□□ -2.03
SSR1-209ENST00000488834 BEX2Q9BXY8 128 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 METTL9Q9H1A3 318 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 DEFB129Q9H1M3 183 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 SRMSQ9H3Y6 488 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 MYOZ1Q9NP98 299 aaPredicted RBP2.39□□□□□ -2.03
SSR1-209ENST00000488834 BIN3Q9NQY0 253 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 CCL28Q9NRJ3 127 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 AGPAT4Q9NRZ5 378 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 IMP3Q9NV31 184 aaKnown RBP2.39□□□□□ -2.03
SSR1-209ENST00000488834 CALYQ9NYX4 217 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 CCDC59Q9P031 241 aaKnown RBP2.39□□□□□ -2.03
SSR1-209ENST00000488834 PCYOX1Q9UHG3 505 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 NAGKQ9UJ70 344 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 RAB23Q9ULC3 237 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 NDUFAF1Q9Y375 327 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.39□□□□□ -2.03
SSR1-209ENST00000488834 HYOU1Q9Y4L1 999 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 AP4S1Q9Y587 144 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 HEBP2Q9Y5Z4 205 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 HSPE1-MOB4S4R3N1 261 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 V9GYY9 64 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 LAMA4Q16363 1823 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 MYO5BQ9ULV0 1848 aa2.39□□□□□ -2.03
SSR1-209ENST00000488834 TROQ12816 1431 aaPredicted RBP2.39□□□□□ -2.03
SSR1-209ENST00000488834 CD109Q6YHK3 1445 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms