RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 ERGIC1Q969X5 290 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 LPAR5Q9H1C0 372 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 VSX1Q9NZR4 365 aaPredicted RBP12.51□□□□□ -0.41
RER1-207ENST00000488353 SUSD2Q9UGT4 822 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 B3GALT5Q9Y2C3 310 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 IGHV1OR21-1A0A087WYE8 117 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 ZNF724A8MTY0 619 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 MASP2O00187 686 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 IGKV3-11P04433 115 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 AMY2BP19961 511 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 PGCP20142 388 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 GALNSP34059 522 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 P2RY1P47900 373 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 ARL4DP49703 201 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 SGCBQ16585 318 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 PLAC9Q5JTB6 97 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 SLC25A45Q8N413 288 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 SPEM1Q8N4L4 309 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 OR5D14Q8NGL3 314 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 Q8WTZ3 238 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 MISP3Q96FF7 219 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 TMEM68Q96MH6 324 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 NEU1Q99519 415 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 PRO1933Q9H354 126 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 NELFAQ9H3P2 528 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 TP53TG5Q9Y2B4 290 aa12.51□□□□□ -0.41
RER1-207ENST00000488353 LSM5Q9Y4Y9 91 aaKnown RBP12.51□□□□□ -0.41
RER1-207ENST00000488353 LOC101059948A0A1B0GTJ6 334 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 RAMP1O60894 148 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 IFNA21P01568 189 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 PAX1P15863 534 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 TAGLN2P37802 199 aaKnown RBP12.5□□□□□ -0.41
RER1-207ENST00000488353 FMODQ06828 376 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 NSDHLQ15738 373 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 C1orf189Q5VU69 101 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 C1orf140Q5VVS0 124 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 C16orf47Q6ZP98 133 aaPredicted RBP12.5□□□□□ -0.41
RER1-207ENST00000488353 SHISA6Q6ZSJ9 500 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 OR1L3Q8NH93 324 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 GPR119Q8TDV5 335 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 TXNIPQ9H3M7 391 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 C14orf166Q9Y224 244 aaKnown RBP12.5□□□□□ -0.41
RER1-207ENST00000488353 WDFY4Q6ZS81 3184 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 A0A1B0GWJ7 208 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 ZNF727A8MUV8 499 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 H3BMH7 237 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 C1QL1O75973 258 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 KNG1P01042 644 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 CXCL1P09341 107 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 FOLR1P15328 257 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 ZNF93P35789 620 aaPredicted RBP12.5□□□□□ -0.41
RER1-207ENST00000488353 AFF3P51826 1226 aaKnown RBP12.5□□□□□ -0.41
RER1-207ENST00000488353 TAS2R46P59540 309 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 HIKESHIQ53FT3 197 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 PDZD11Q5EBL8 140 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 GFI1BQ5VTD9 330 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 LCN10Q6JVE6 187 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 M1APQ8TC57 530 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 SHDQ96IW2 340 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 WNT16Q9UBV4 365 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 SRPK3Q9UPE1 567 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 CPAMD8Q8IZJ3 1885 aa12.5□□□□□ -0.41
RER1-207ENST00000488353 A0A0A6YYD4 124 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 A8MVM7 634 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 E5RGE8 158 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 MKRN2OSH3BPM6 223 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 H3BQ15 152 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 TCAPO15273 167 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 SOCS1O15524 211 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 TSPAN2O60636 221 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 HEXBP07686 556 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 ZNF823P16415 610 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 FOXO1Q12778 655 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 DEGS2Q6QHC5 323 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 DCXRQ7Z4W1 244 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.49□□□□□ -0.41
RER1-207ENST00000488353 C5orf34Q96MH7 638 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 PPP1R14DQ9NXH3 145 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 NSG2Q9Y328 171 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 ALG1L2C9J202 215 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 SDCBPO00560 298 aaPredicted RBP12.49□□□□□ -0.41
RER1-207ENST00000488353 PLPP3O14495 311 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 MPIG6BO95866 241 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 FABP4P15090 132 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 CEACAM6P40199 344 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 POLR2HP52434 150 aaKnown RBP12.49□□□□□ -0.41
RER1-207ENST00000488353 ARFRP1Q13795 201 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 FAM189A2Q15884 450 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 WDFY1Q8IWB7 410 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 OR5R1Q8NH85 324 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 KCNG3Q8TAE7 436 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 RAB39BQ96DA2 213 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 ADAT3Q96EY9 351 aaPredicted RBP12.49□□□□□ -0.41
RER1-207ENST00000488353 PCED1AQ9H1Q7 454 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 DUSP15Q9H1R2 295 aaPredicted RBP12.49□□□□□ -0.41
RER1-207ENST00000488353 SIRT7Q9NRC8 400 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 CENPMQ9NSP4 180 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 EHFQ9NZC4 300 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 PISDQ9UG56 409 aa12.49□□□□□ -0.41
RER1-207ENST00000488353 PHF3Q92576 2039 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms