RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 CEACAM19Q7Z692 300 aa13.21□□□□□ -0.29
C9orf3-219ENST00000488186 MKXQ8IYA7 352 aa13.21□□□□□ -0.29
C9orf3-219ENST00000488186 GCSAMQ8N6F7 178 aa13.21□□□□□ -0.29
C9orf3-219ENST00000488186 TSPAN14Q8NG11 270 aa13.21□□□□□ -0.29
C9orf3-219ENST00000488186 TMEM203Q969S6 136 aa13.21□□□□□ -0.29
C9orf3-219ENST00000488186 PKIBQ9C010 78 aa13.21□□□□□ -0.29
C9orf3-219ENST00000488186 ZNF665Q9H7R5 613 aa13.21□□□□□ -0.29
C9orf3-219ENST00000488186 TMEM165Q9HC07 324 aa13.21□□□□□ -0.29
C9orf3-219ENST00000488186 NSD1Q96L73 2696 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-219ENST00000488186 TANC2Q9HCD6 1990 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 IGKV1-9A0A0C4DH69 117 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 NDUFA2O43678 99 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 RHBDL1O75783 438 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 INMTO95050 263 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 ALX3O95076 343 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 LHBP01229 141 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 MUC1P15941 1255 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-219ENST00000488186 RPS11P62280 158 aaKnown RBP eCLIP13.2□□□□□ -0.3
C9orf3-219ENST00000488186 DOC2BQ14184 412 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 TMEM249Q2WGJ8 235 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 ZNF404Q494X3 552 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 UBE2UQ5VVX9 321 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 CYB5R2Q6BCY4 276 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 NLRC3Q7RTR2 1065 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 RFT1Q96AA3 541 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 TMIGD2Q96BF3 282 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 SPACA5Q96QH8 159 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 TMEM246Q9BRR3 403 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 TMEM138Q9NPI0 162 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 MIOXQ9UGB7 285 aa13.2□□□□□ -0.3
C9orf3-219ENST00000488186 IGHV3OR15-7A0A075B7D8 119 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 SRRM5B3KS81 715 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 TRAPPC2LH3BP13 241 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 SYNGR1O43759 233 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 NXPH2O95156 264 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 FSTL3O95633 263 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 RPS2P15880 293 aaKnown RBP13.19□□□□□ -0.3
C9orf3-219ENST00000488186 EGR1P18146 543 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 PCMT1P22061 227 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 BDKRB2P30411 391 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 IL24Q13007 206 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 KISS1Q15726 138 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 NEDD8Q15843 81 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 SLC25A26Q70HW3 274 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 CALHM1Q8IU99 346 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 PHC2Q8IXK0 858 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 ORAI1Q96D31 301 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 DERL3Q96Q80 235 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 SLITRK2Q9H156 845 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 PATZ1Q9HBE1 687 aaKnown RBP13.19□□□□□ -0.3
C9orf3-219ENST00000488186 TCF7L1Q9HCS4 588 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 NOX4Q9NPH5 578 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 SNTG1Q9NSN8 517 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 RASL12Q9NYN1 266 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.19□□□□□ -0.32e-6■□□□□ 8.2
C9orf3-219ENST00000488186 HIVEP2P31629 2446 aa13.19□□□□□ -0.3
C9orf3-219ENST00000488186 IGKV1-27A0A075B6S5 117 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 TRBV5-7A0A0A0MS05 114 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 CEACAM18A8MTB9 384 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 CCRL2O00421 344 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 RGS9O75916 674 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-219ENST00000488186 IGHV2-5P01817 119 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 GYPAP02724 150 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 MAS1P04201 325 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 TMEM225BP0DP42 221 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 IL2RGP31785 369 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 LMO4P61968 165 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 RPS25P62851 125 aaKnown RBP13.18□□□□□ -0.3
C9orf3-219ENST00000488186 HOXA4Q00056 320 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-219ENST00000488186 TEX36Q5VZQ5 186 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 CLEC9AQ6UXN8 241 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 DCDC5Q6ZRR9 648 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 LINC01356Q8N9X3 169 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 PNLDC1Q8NA58 520 aaKnown RBP13.18□□□□□ -0.3
C9orf3-219ENST00000488186 POC1AQ8NBT0 407 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 OR8B3Q8NGG8 313 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 OR51F2Q8NH61 342 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 SLAMF9Q96A28 289 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 CEP19Q96LK0 163 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 OR8B2Q96RD0 313 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 NR1H4Q96RI1 486 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-219ENST00000488186 S100A13Q99584 98 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 FOXJ3Q9UPW0 622 aa13.18□□□□□ -0.3
C9orf3-219ENST00000488186 SETD2Q9BYW2 2564 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-219ENST00000488186 B4DSR2 109 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 ADAM20O43506 726 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 SPRY1O43609 319 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-219ENST00000488186 TGFAP01135 160 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 ALDOBP05062 364 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 PGA5P0DJD9 388 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 IGHV4-31P0DP07 118 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 CPT2P23786 658 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 MPZP25189 248 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 GABRA5P31644 462 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 ZNF93P35789 620 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-219ENST00000488186 GABRA2P47869 451 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 PDZK1IP1Q13113 114 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 SMIM21Q3B7S5 101 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 HSD17B12Q53GQ0 312 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 ESCO2Q56NI9 601 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms