RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 TMEM27Q9HBJ8 222 aa9.4□□□□□ -0.9
TRIM56-204ENST00000487252 STUB1Q9UNE7 303 aa9.4□□□□□ -0.9
TRIM56-204ENST00000487252 IGHV3-64DA0A0J9YX35 117 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 LOC100506127A0A0U1RQW1 187 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 ZNF670-ZNF695F2Z2N8 137 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 J3QRE1 110 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 KPNA4O00629 521 aaPredicted RBP9.39□□□□□ -0.91
TRIM56-204ENST00000487252 BHLHE40O14503 412 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 MYL12BO14950 172 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 ADAM20O43506 726 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 NDUFA2O43678 99 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 CHP2O43745 196 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 SYNGR1O43759 233 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 PTP4A3O75365 173 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 HTR1FP30939 366 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 WNT4P56705 351 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 HOXA4Q00056 320 aaPredicted RBP9.39□□□□□ -0.91
TRIM56-204ENST00000487252 KCNJ8Q15842 424 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 C10orf128Q5T292 105 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 ARMC4Q5T2S8 1044 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 Q6ZS46 218 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 LSMEM1Q8N8F7 131 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 OR2T33Q8NG76 320 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 OR51G2Q8NGK0 314 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 OR9Q1Q8NGQ5 310 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 ERGIC1Q969X5 290 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 NKX3-1Q99801 234 aaPredicted RBP9.39□□□□□ -0.91
TRIM56-204ENST00000487252 ZNF649Q9BS31 505 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 MRPL13Q9BYD1 178 aaKnown RBP9.39□□□□□ -0.91
TRIM56-204ENST00000487252 OR2H1Q9GZK4 316 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 OR52D1Q9H346 318 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 SF3B6Q9Y3B4 125 aaKnown RBP9.39□□□□□ -0.91
TRIM56-204ENST00000487252 UGT2A1Q9Y4X1 527 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 PEX16Q9Y5Y5 336 aa9.39□□□□□ -0.91
TRIM56-204ENST00000487252 DNAH10Q8IVF4 4471 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 A0A1B0GWA3 101 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 NKX6-3A6NJ46 265 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 F5H5P2 479 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 LGALS8O00214 317 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 DVL1O14640 695 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 MAGEB3O15480 346 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 SERPINI2O75830 405 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 IGF2P01344 180 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 OCM2P0CE71 109 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 OCMP0CE72 109 aaPredicted RBP9.38□□□□□ -0.91
TRIM56-204ENST00000487252 IFI30P13284 250 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 RAC2P15153 192 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 MYL12AP19105 171 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 PSMA1P25786 263 aaKnown RBP9.38□□□□□ -0.91
TRIM56-204ENST00000487252 ZNF84P51523 738 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 ZNF45Q02386 682 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 CD200R1LQ6Q8B3 271 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 LHFPL2Q6ZUX7 228 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 CCDC190Q86UF4 302 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 GID4Q8IVV7 300 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 CELF2-AS1Q8N7Q2 184 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 DRAXINQ8NBI3 349 aaPredicted RBP9.38□□□□□ -0.91
TRIM56-204ENST00000487252 OR8G5Q8NG78 346 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 OR52N1Q8NH53 320 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 KCNN2Q9H2S1 579 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 KAAG1Q9UBP8 84 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 BAIAP2Q9UQB8 552 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 SIGLEC7Q9Y286 467 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 MED31Q9Y3C7 131 aa9.38□□□□□ -0.91
TRIM56-204ENST00000487252 hCG_2014768A0A024R1R8 64 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 TCRBV4S1A1TA0A5B7 111 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 HTR3EA5X5Y0 456 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 LRRN3E7EW58 273 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 PFDN1O60925 122 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 PEX14O75381 377 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 ABHD16AO95870 558 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 IRF2P14316 349 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 SOX6P35712 828 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 BDH1Q02338 343 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 MAB21L1Q13394 359 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 FHL1Q13642 323 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 CNN3Q15417 329 aaKnown RBP9.37□□□□□ -0.91
TRIM56-204ENST00000487252 HCP5Q6MZN7 132 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 CMTM4Q8IZR5 234 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 PFN4Q8NHR9 129 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 FANK1Q8TC84 345 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 PTP4A1Q93096 173 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 BPIFA2Q96DR5 249 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 PRSS22Q9GZN4 317 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 MEPEQ9NQ76 525 aaPredicted RBP9.37□□□□□ -0.91
TRIM56-204ENST00000487252 CMC2Q9NRP2 79 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 CHCHD3Q9NX63 227 aaKnown RBP9.37□□□□□ -0.91
TRIM56-204ENST00000487252 TAS2R5Q9NYW4 299 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 ONECUT1Q9UBC0 465 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 SSR3Q9UNL2 185 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 STARD10Q9Y365 291 aa9.37□□□□□ -0.91
TRIM56-204ENST00000487252 TRDV1A0A1B0GX56 115 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 C11orf98E9PRG8 122 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 UPK1BO75841 260 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 SLC2A10O95528 541 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 IL1AP01583 271 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 IGHG1P01857 330 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 GALP22466 123 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 FGF9P31371 208 aaPredicted RBP9.36□□□□□ -0.91
TRIM56-204ENST00000487252 CDAP32320 146 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms