RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 DMDP11532 3685 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 NUP210LQ5VU65 1888 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 A0A1W2PNU3 283 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-216ENST00000487043 A8MUA0 341 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 KRTAP16-1A8MUX0 517 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 ZNF705EA8MWA4 302 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-216ENST00000487043 TRDCB7Z8K6 153 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 C9J4A7 227 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 CASQ2O14958 399 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-216ENST00000487043 CLOCKO15516 846 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 HCN1O60741 890 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 DPM1O60762 260 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 ZNF254O75437 659 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 DUSP14O95147 198 aaKnown RBP3.08□□□□□ -1.92
PTCD3-216ENST00000487043 H6PDO95479 791 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 ZNF682O95780 498 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 CLPSP04118 112 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 SEMG1P04279 462 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 BCHEP06276 602 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 FOLR2P14207 255 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 TCN2P20062 427 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 VDAC1P21796 283 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 FASP25445 335 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 AQP1P29972 269 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 GABRA3P34903 492 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 MAGEA2P43356 314 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 PPICP45877 212 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 CLDN6P56747 220 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 FUT5Q11128 374 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 TMED1Q13445 227 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 ASAH1Q13510 395 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 NCF4Q15080 339 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 ZNHIT3Q15649 155 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-216ENST00000487043 DUSP7Q16829 419 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 C6orf226Q5I0X4 101 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 ENPP6Q6UWR7 440 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 SHISA6Q6ZSJ9 500 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 PRSS58Q8IYP2 241 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 FAM86B1Q8N7N1 296 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 ZNF321PQ8N8H1 164 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 COX18Q8N8Q8 333 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 FAM83FQ8NEG4 500 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-216ENST00000487043 B3GNT7Q8NFL0 401 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 OR2Y1Q8NGV0 311 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 OR8K3Q8NH51 312 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 KCNG3Q8TAE7 436 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 FAM110BQ8TC76 370 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 MAGEE2Q8TD90 523 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-216ENST00000487043 GPR151Q8TDV0 419 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 PAQR8Q8TEZ7 354 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 ZNF721Q8TF20 911 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 RASSF5Q8WWW0 418 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 ST8SIA1Q92185 356 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 CDS1Q92903 461 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 TAMM41Q96BW9 452 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 SDF2Q99470 211 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 MCHR1Q99705 422 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 DOHHQ9BU89 302 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 NUDT9Q9BW91 350 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 RSPO3Q9BXY4 272 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-216ENST00000487043 OR8D2Q9GZM6 311 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 GFRA4Q9GZZ7 299 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 SLC38A1Q9H2H9 487 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 FOLH1BQ9HBA9 442 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 NUDT15Q9NV35 164 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 SLC2A8Q9NY64 477 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 B3GNT2Q9NY97 397 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 C3orf18Q9UK00 162 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 FARSAQ9Y285 508 aaKnown RBP3.08□□□□□ -1.92
PTCD3-216ENST00000487043 LRRC42Q9Y546 428 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 DSPPQ9NZW4 1301 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 MYO15AQ9UKN7 3530 aa3.08□□□□□ -1.92
PTCD3-216ENST00000487043 RIF1Q5UIP0 2472 aaKnown RBP3.08□□□□□ -1.92
PTCD3-216ENST00000487043 CCDC88CQ9P219 2028 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 KNTC1P50748 2209 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 A0A1W2PQ72 361 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 DHRS7CA6NNS2 312 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 SRRM5B3KS81 715 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 C21orf140B9A014 251 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 K7ENP7 123 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 ACOX3O15254 700 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 TPST1O60507 370 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 WBP4O75554 376 aaKnown RBP3.07□□□□□ -1.92
PTCD3-216ENST00000487043 KCNK2O95069 426 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 TNFSF15O95150 251 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 EPPINO95925 133 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 LGI1O95970 557 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 CST1P01037 141 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 IGHG4P01861 327 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 OPN1SWP03999 348 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 FABP3P05413 133 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 DBIP07108 87 aaKnown RBP3.07□□□□□ -1.92
PTCD3-216ENST00000487043 PABPC4LP0CB38 370 aaKnown RBP3.07□□□□□ -1.92
PTCD3-216ENST00000487043 SFTPCP11686 197 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 CD82P27701 267 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 SHC1P29353 583 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 LCN1P31025 176 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 VHLP40337 213 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 PRRX1P54821 245 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 PSMD4P55036 377 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms