RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 CD276Q5ZPR3 534 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 DCDC5Q6ZRR9 648 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 SLC36A1Q7Z2H8 476 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 CEACAM19Q7Z692 300 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 SATL1Q86VE3 508 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 SPARTQ8N0X7 666 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 ZFP41Q8N8Y5 198 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 BOLLQ8N9W6 283 aaKnown RBP6.96□□□□□ -1.3
SF3A1-208ENST00000485618 LINC01356Q8N9X3 169 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 OR8B3Q8NGG8 313 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 ZNF420Q8TAQ5 688 aaPredicted RBP6.96□□□□□ -1.3
SF3A1-208ENST00000485618 RPL3LQ92901 407 aaKnown RBP6.96□□□□□ -1.3
SF3A1-208ENST00000485618 TMIGD2Q96BF3 282 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 FOXRED1Q96CU9 486 aaPredicted RBP6.96□□□□□ -1.3
SF3A1-208ENST00000485618 ADAT3Q96EY9 351 aaPredicted RBP6.96□□□□□ -1.3
SF3A1-208ENST00000485618 OR8B2Q96RD0 313 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 TMED9Q9BVK6 235 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 DNTTIP1Q9H147 329 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 FOXJ3Q9UPW0 622 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 LSM2Q9Y333 95 aaKnown RBP6.96□□□□□ -1.3
SF3A1-208ENST00000485618 TRBV5-5A0A0J9YX44 114 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 CCRL2O00421 344 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 GPR37O15354 613 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 NOS1APO75052 506 aaPredicted RBP6.95□□□□□ -1.3
SF3A1-208ENST00000485618 ZNF780AO75290 641 aaPredicted RBP6.95□□□□□ -1.3
SF3A1-208ENST00000485618 GPX5O75715 221 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 LHBP01229 141 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 IGHV2-70P01814 119 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 GLRA1P23415 457 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 PSMB9P28065 219 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 MAP2K4P45985 399 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 PDZK1IP1Q13113 114 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 KISS1Q15726 138 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 HSD17B12Q53GQ0 312 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 ESCO2Q56NI9 601 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 AVPI1Q5T686 147 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 UBE2UQ5VVX9 321 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 WDR82Q6UXN9 313 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 SAXO1Q8IYX7 474 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 NKAIN3Q8N8D7 197 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 POC1AQ8NBT0 407 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 DEFB108BQ8NET1 73 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 OR51A4Q8NGJ6 313 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 OR13C9Q8NGT0 318 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 OR51F2Q8NH61 342 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 TRMT10AQ8TBZ6 339 aaKnown RBP6.95□□□□□ -1.3
SF3A1-208ENST00000485618 NPRL2Q8WTW4 380 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 HPSE2Q8WWQ2 592 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 AQP3Q92482 292 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 DVL3Q92997 716 aaPredicted RBP6.95□□□□□ -1.3
SF3A1-208ENST00000485618 NEIL1Q96FI4 390 aaPredicted RBP6.95□□□□□ -1.3
SF3A1-208ENST00000485618 PGLYRP3Q96LB9 341 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 CEP19Q96LK0 163 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 OR5M11Q96RB7 305 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 ZNF665Q9H7R5 613 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 TMEM165Q9HC07 324 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 GSTK1Q9Y2Q3 226 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 CACNG2Q9Y698 323 aa6.95□□□□□ -1.3
SF3A1-208ENST00000485618 SIRT4Q9Y6E7 314 aaPredicted RBP6.95□□□□□ -1.3
SF3A1-208ENST00000485618 TRBV5-7A0A0A0MS05 114 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 TRAV20A0A0B4J274 112 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 IGHV4-61A0A0C4DH41 118 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 SRRM5B3KS81 715 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 C3orf80F5H4A9 247 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 PDCD5O14737 125 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 NDUFB3O43676 98 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 RGS9O75916 674 aaPredicted RBP6.94□□□□□ -1.3
SF3A1-208ENST00000485618 ECDO95905 644 aaPredicted RBP6.94□□□□□ -1.3
SF3A1-208ENST00000485618 LALBAP00709 142 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 RPS2P15880 293 aaKnown RBP6.94□□□□□ -1.3
SF3A1-208ENST00000485618 FSTP19883 344 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 HNF1AP20823 631 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 ANOS1P23352 680 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 GATA3P23771 443 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 MYL9P24844 172 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 MPZP25189 248 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 ZNF93P35789 620 aaPredicted RBP6.94□□□□□ -1.3
SF3A1-208ENST00000485618 PMELP40967 661 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 CAPZA1P52907 286 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 SCGB2A2Q13296 93 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 ZMYND11Q15326 602 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 TMEM249Q2WGJ8 235 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 TIMM50Q3ZCQ8 353 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 ZNF404Q494X3 552 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 LRRC10Q5BKY1 277 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 TEX36Q5VZQ5 186 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 GLT8D1Q68CQ7 371 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 XAF1Q6GPH4 301 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 ZNF826PQ6ZT77 177 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 SLC25A26Q70HW3 274 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 GLCCI1Q86VQ1 547 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 ANGPTL5Q86XS5 388 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 PHC2Q8IXK0 858 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 C11orf53Q8IXP5 236 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 OR10AC1Q8NH08 325 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 CLDND2Q8NHS1 167 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 SPATA3Q8NHX4 192 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 PPP1R35Q8TAP8 253 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 TBC1D15Q8TC07 691 aa6.94□□□□□ -1.3
SF3A1-208ENST00000485618 SGCDQ92629 289 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms