RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 SFXN3Q9BWM7 321 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 DEFB129Q9H1M3 183 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 CHMP4BQ9H444 224 aaKnown RBP1.23□□□□□ -2.21
CACUL1-202ENST00000477583 REEP1Q9H902 201 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 ZC4H2Q9NQZ6 224 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 TREX1Q9NSU2 369 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 TULP4Q9NRJ4 1543 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 PPLO60437 1756 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 OVOS2A0A0J9YW53 1432 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 OVOS2Q6IE36 1432 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 EDC4Q6P2E9 1401 aaKnown RBP1.23□□□□□ -2.21
CACUL1-202ENST00000477583 SSH2Q76I76 1423 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 RIMS2Q9UQ26 1411 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 MYOM1P52179 1685 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 USP54Q70EL1 1684 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 PREX1Q8TCU6 1659 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 RIMBP3CA6NJZ7 1639 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 RIMBP3BA6NNM3 1639 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 ARHGEF10O15013 1369 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 NID2Q14112 1375 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 RIMBP3Q9UFD9 1639 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 ANKRD12Q6UB98 2062 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 SCN4AP35499 1836 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 ADGRA3Q8IWK6 1321 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 TTC21AQ8NDW8 1320 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 WDR19Q8NEZ3 1342 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 IGKV3D-11A0A0A0MRZ8 115 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 A0A0B4J2E0 115 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 IGKV2-24A0A0C4DH68 120 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 ZNF99A8MXY4 864 aaPredicted RBP1.22□□□□□ -2.21
CACUL1-202ENST00000477583 CENPBD1B2RD01 187 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 LINC01619G3V211 115 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 PSPHP1O15172 72 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 AKR7A2O43488 359 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 CCDC22O60826 627 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 FARS2O95363 451 aaKnown RBP1.22□□□□□ -2.21
CACUL1-202ENST00000477583 PTHP01270 115 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 TPM2P07951 284 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 GFAPP14136 432 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 CXCR1P25024 350 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 CD34P28906 385 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 MAGEA1P43355 309 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 PPP1CAP62136 330 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 INCA1Q0VD86 236 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 BAMBIQ13145 260 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 BTN1A1Q13410 526 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 HADHQ16836 314 aaKnown RBP1.22□□□□□ -2.21
CACUL1-202ENST00000477583 SPIN3Q5JUX0 258 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 SLC30A8Q8IWU4 369 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 SGPP2Q8IWX5 399 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 CMTM8Q8IZV2 173 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 ORMDL3Q8N138 153 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 TRAM1L1Q8N609 369 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 SLC25A29Q8N8R3 303 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 BBOF1Q8ND07 529 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 ZNF680Q8NEM1 530 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 OR4M2Q8NGB6 313 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 GPX8Q8TED1 209 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 GLYATL2Q8WU03 294 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 ISOC2Q96AB3 205 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 TMEM159Q96B96 161 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 RDH12Q96NR8 316 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 CSPG4P5Q96PW8 444 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 ALS2CR12Q96Q35 445 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 C1orf50Q9BV19 199 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 IQCGQ9H095 443 aaKnown RBP1.22□□□□□ -2.21
CACUL1-202ENST00000477583 C8orf33Q9H7E9 229 aaPredicted RBP1.22□□□□□ -2.21
CACUL1-202ENST00000477583 PRSS16Q9NQE7 514 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 HEBP1Q9NRV9 189 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 CA10Q9NS85 328 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 RWDD2AQ9UIY3 292 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 ZNF229Q9UJW7 825 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 DDX19BQ9UMR2 479 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 SETD1AO15047 1707 aaKnown RBP1.22□□□□□ -2.21
CACUL1-202ENST00000477583 ARHGEF28Q8N1W1 1705 aaKnown RBP1.22□□□□□ -2.21
CACUL1-202ENST00000477583 CD163L1Q9NR16 1453 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 ZNF142P52746 1687 aaPredicted RBP1.22□□□□□ -2.21
CACUL1-202ENST00000477583 OVOS2A0A0G2JMS6 1433 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 NSD3Q9BZ95 1437 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 ADGRL3Q9HAR2 1447 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 PHRF1Q9P1Y6 1649 aaKnown RBP1.22□□□□□ -2.21
CACUL1-202ENST00000477583 ALKQ9UM73 1620 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 NRXN3Q9Y4C0 1643 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 KIF1BO60333 1816 aa1.22□□□□□ -2.21
CACUL1-202ENST00000477583 A0A1W2PP64 1363 aa1.21□□□□□ -2.21
CACUL1-202ENST00000477583 NWD1Q149M9 1564 aa1.21□□□□□ -2.22
CACUL1-202ENST00000477583 NRKQ7Z2Y5 1582 aa1.21□□□□□ -2.22
CACUL1-202ENST00000477583 XRN1Q8IZH2 1706 aaKnown RBP1.21□□□□□ -2.22
CACUL1-202ENST00000477583 SIGLEC1Q9BZZ2 1709 aa1.21□□□□□ -2.22
CACUL1-202ENST00000477583 ANKRD26Q9UPS8 1709 aa1.21□□□□□ -2.22
CACUL1-202ENST00000477583 RIMS1Q86UR5 1692 aaKnown RBP1.21□□□□□ -2.22
CACUL1-202ENST00000477583 LOC102724200A0A096LPH7 203 aaPredicted RBP1.21□□□□□ -2.22
CACUL1-202ENST00000477583 IGKV1-6A0A0C4DH72 117 aa1.21□□□□□ -2.22
CACUL1-202ENST00000477583 A0A1W2PNN7 141 aa1.21□□□□□ -2.22
CACUL1-202ENST00000477583 ISPDA4D126 451 aa1.21□□□□□ -2.22
CACUL1-202ENST00000477583 OR6C70A6NIJ9 312 aa1.21□□□□□ -2.22
CACUL1-202ENST00000477583 SLC22A20A6NK97 555 aa1.21□□□□□ -2.22
CACUL1-202ENST00000477583 A8MWL6 223 aa1.21□□□□□ -2.22
CACUL1-202ENST00000477583 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.21□□□□□ -2.22
CACUL1-202ENST00000477583 CLDN34H7C241 214 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms