RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 FOXJ3Q9UPW0 622 aa5.43□□□□□ -1.54
CLDN4-205ENST00000476494 DHDHQ9UQ10 334 aa5.43□□□□□ -1.54
CLDN4-205ENST00000476494 SLC22A13Q9Y226 551 aa5.43□□□□□ -1.54
CLDN4-205ENST00000476494 HECTD4Q9Y4D8 3996 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 A0A075B6Q4 140 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 TRBV5-7A0A0A0MS05 114 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 XRCC2O43543 280 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 SYT7O43581 403 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 ICMTO60725 284 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 RAD51DO75771 328 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 CDRT1O95170 752 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 IGLV3-1P01715 115 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 TTRP02766 147 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 LCATP04180 440 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 ANXA2P07355 339 aaKnown RBP5.42□□□□□ -1.54
CLDN4-205ENST00000476494 ERCC1P07992 297 aaPredicted RBP5.42□□□□□ -1.54
CLDN4-205ENST00000476494 ZNF182P17025 639 aaPredicted RBP5.42□□□□□ -1.54
CLDN4-205ENST00000476494 SRMP19623 302 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 CCL1P22362 96 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 NR4A1P22736 598 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 GATA3P23771 443 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 CALRP27797 417 aaKnown RBP5.42□□□□□ -1.54
CLDN4-205ENST00000476494 RPS19P39019 145 aaKnown RBP5.42□□□□□ -1.54
CLDN4-205ENST00000476494 GPR6P46095 362 aaPredicted RBP5.42□□□□□ -1.54
CLDN4-205ENST00000476494 SLC6A9P48067 706 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 CAPZA1P52907 286 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 TMEM33P57088 247 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 MFGE8Q08431 387 aaPredicted RBP5.42□□□□□ -1.54
CLDN4-205ENST00000476494 MALLQ13021 153 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 TBC1D28Q2M2D7 210 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 HIKESHIQ53FT3 197 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 ZBTB37Q5TC79 503 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 COLCA1Q6ZS62 124 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 C9orf139Q6ZV77 190 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 FAM57BQ71RH2 274 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 PGAP1Q75T13 922 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 SERPINA12Q8IW75 414 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 CDH26Q8IXH8 852 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 PARP16Q8N5Y8 322 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 PLPP7Q8NBV4 271 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 CPEB3Q8NE35 698 aaKnown RBP5.42□□□□□ -1.54
CLDN4-205ENST00000476494 DEFB108BQ8NET1 73 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 OR8B12Q8NGG6 310 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 OR5D14Q8NGL3 314 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 AKR7LQ8NHP1 331 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 FGFBP3Q8TAT2 258 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 NDNFQ8TB73 568 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 TSEN15Q8WW01 171 aaKnown RBP5.42□□□□□ -1.54
CLDN4-205ENST00000476494 ACOT12Q8WYK0 555 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 YIPF5Q969M3 257 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 TMEM106AQ96A25 262 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 SLC25A46Q96AG3 418 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 APOBEC3DQ96AK3 386 aaPredicted RBP5.42□□□□□ -1.54
CLDN4-205ENST00000476494 KCTD12Q96CX2 325 aaKnown RBP5.42□□□□□ -1.54
CLDN4-205ENST00000476494 POM121L2Q96KW2 1035 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 DERL3Q96Q80 235 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 ZNF665Q9H7R5 613 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 ZNF275Q9NSD4 429 aaPredicted RBP5.42□□□□□ -1.54
CLDN4-205ENST00000476494 TBCCD1Q9NVR7 557 aa5.42□□□□□ -1.54
CLDN4-205ENST00000476494 LOC100509620A0A075B734 347 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 A0A1B0GTI1 187 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 LOC107986453A0A1B0GWG9 222 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 WI2-2373I1.2A0A1W2PRP0 233 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 C5orf49A4QMS7 147 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 H0YL77 283 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 P2RY10O00398 339 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 RP2O75695 350 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 DHRS3O75911 302 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 IGKV3-15P01624 115 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 HPXP02790 462 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 PATE4P0C8F1 98 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 ZNF14P17017 642 aaPredicted RBP5.41□□□□□ -1.54
CLDN4-205ENST00000476494 FSTP19883 344 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 RAB3BP20337 219 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 SDC2P34741 201 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 DDOSTP39656 456 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 MAP2K3P46734 347 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 SCAND1P57086 179 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 PPP3R1P63098 170 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 ZNF404Q494X3 552 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 MZT2AQ6P582 158 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 MDP1Q86V88 176 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 FTMTQ8N4E7 242 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 SLC30A7Q8NEW0 376 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 OR13C3Q8NGS6 347 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 MCFD2Q8NI22 146 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 MUC7Q8TAX7 377 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 OR51E1Q8TCB6 317 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 PP6455Q8WZ26 134 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 RGP1Q92546 391 aaPredicted RBP5.41□□□□□ -1.54
CLDN4-205ENST00000476494 SPSB4Q96A44 273 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 SGK3Q96BR1 496 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 FOXRED1Q96CU9 486 aaPredicted RBP5.41□□□□□ -1.54
CLDN4-205ENST00000476494 CPNE2Q96FN4 548 aaPredicted RBP5.41□□□□□ -1.54
CLDN4-205ENST00000476494 ZNF75AQ96N20 296 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 TECTBQ96PL2 329 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 OR14A2Q96R54 314 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 TSC22D3Q99576 134 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 KCNS3Q9BQ31 491 aa5.41□□□□□ -1.54
CLDN4-205ENST00000476494 OCSTAMPQ9BR26 566 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms