RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 H0YIG0 161 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 JMJD7P0C870 316 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 ZNF25P17030 456 aaPredicted RBP7.39□□□□□ -1.23
VAPB-205ENST00000476395 HLA-GP17693 338 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 MPZP25189 248 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 MSX1P28360 303 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 SULT1A2P50226 295 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 TNFRSF9Q07011 255 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 C1orf100Q5SVJ3 147 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 FAM220AQ7Z4H9 259 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 OR10S1Q8NGN2 331 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 ABHD5Q8WTS1 349 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 ASB13Q8WXK3 278 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 SLC39A7Q92504 469 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 SNX22Q96L94 193 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 C1orf147Q96MC9 270 aaPredicted RBP7.39□□□□□ -1.23
VAPB-205ENST00000476395 SIRT7Q9NRC8 400 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 HS3ST3A1Q9Y663 406 aa7.39□□□□□ -1.23
VAPB-205ENST00000476395 KIR2DS5A0A0G2JLQ3 304 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 A0A0G2JNG1 304 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 SEC14L6B5MCN3 397 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 KIR2DS3K7RE56 304 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 GEMIN2O14893 280 aaKnown RBP7.38□□□□□ -1.23
VAPB-205ENST00000476395 CYB5BO43169 146 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 GSTP1P09211 210 aaKnown RBP7.38□□□□□ -1.23
VAPB-205ENST00000476395 CCL20P78556 96 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 SSBP1Q04837 148 aaKnown RBP7.38□□□□□ -1.23
VAPB-205ENST00000476395 KIR2DS5Q14953 304 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 PNLIPRP3Q17RR3 467 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 RIPPLY2Q5TAB7 128 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 CLEC18BQ6UXF7 455 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 ZNF610Q8N9Z0 462 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 C22orf15Q8WYQ4 148 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 FRZBQ92765 325 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 MUCL1Q96DR8 90 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 SAT2Q96F10 170 aaPredicted RBP7.38□□□□□ -1.23
VAPB-205ENST00000476395 SPACA5Q96QH8 159 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 ADOQ96SZ5 270 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 ABHD14AQ9BUJ0 271 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 NUDT9Q9BW91 350 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 C5orf66Q9H5L9 145 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 OR5H15A6NDH6 313 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 FRG2CA6NGY1 282 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 OR5H1A6NKK0 313 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 HSPB2A8KAH6 182 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 A8MWP6 167 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 C11orf98E9PRG8 122 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 MS4A18H0YCH9 400 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 DUS4LO95620 317 aaKnown RBP7.38□□□□□ -1.23
VAPB-205ENST00000476395 PTBP3O95758 552 aaKnown RBP7.38□□□□□ -1.23
VAPB-205ENST00000476395 CSTBP04080 98 aaKnown RBP7.38□□□□□ -1.23
VAPB-205ENST00000476395 HKR1P10072 659 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 SLC6A9P48067 706 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 SUPT4H1P63272 117 aaKnown RBP7.38□□□□□ -1.23
VAPB-205ENST00000476395 FMODQ06828 376 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 HSPB2Q16082 182 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 MS4A18Q3C1V0 323 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 TMEM268Q5VZI3 342 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 OR2T2Q6IF00 324 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 ZNF440Q8IYI8 595 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 SELENOHQ8IZQ5 122 aaKnown RBP7.38□□□□□ -1.23
VAPB-205ENST00000476395 LRRC18Q8N456 261 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 C15orf40Q8WUR7 153 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 MALSU1Q96EH3 234 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 PACRGQ96M98 296 aaPredicted RBP7.38□□□□□ -1.23
VAPB-205ENST00000476395 SNHG12Q9BXW3 62 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 PRODH2Q9UF12 536 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 PLPP3O14495 311 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 PPP1R2P9O14990 202 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 ISG15P05161 165 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 MMP7P09237 267 aaPredicted RBP7.38□□□□□ -1.23
VAPB-205ENST00000476395 TRGC1P0CF51 173 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 SERPINA2P20848 420 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 CD200P41217 278 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 CFHR1Q03591 330 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 ELOBQ15370 118 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 FAM185AQ8N0U4 392 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 GALNT14Q96FL9 552 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 WFIKKN1Q96NZ8 548 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 OR5B2Q96R09 309 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 CCDC3Q9BQI4 270 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 FOXQ1Q9C009 403 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 OR11A1Q9GZK7 315 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 METTL8Q9H825 291 aaKnown RBP7.38□□□□□ -1.23
VAPB-205ENST00000476395 CBLN4Q9NTU7 201 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 TP53TG5Q9Y2B4 290 aa7.38□□□□□ -1.23
VAPB-205ENST00000476395 SPAG17Q6Q759 2223 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 TNFP01375 233 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 HTR2CP28335 458 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 THBS4P35443 961 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 CAPZBP47756 277 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 RPL27P61353 136 aaKnown RBP7.37□□□□□ -1.23
VAPB-205ENST00000476395 SGCBQ16585 318 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 NKAIN1Q4KMZ8 207 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 PRSS54Q6PEW0 395 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 OOSP2Q86WS3 158 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 ANGPTL5Q86XS5 388 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 KDM8Q8N371 416 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 SLC26A10Q8NG04 563 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 OR1J1Q8NGS3 322 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms