RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 RALYQ9UKM9 306 aaKnown RBP8.76□□□□□ -1.01
PRPF38A-202ENST00000474048 MRPS7Q9Y2R9 242 aaKnown RBP8.76□□□□□ -1.01
PRPF38A-202ENST00000474048 RTTNQ86VV8 2226 aa8.76□□□□□ -1.01
PRPF38A-202ENST00000474048 A0A0A6YYH2 397 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 A6NJ64 397 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 H0YL77 283 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 HS3ST1O14792 307 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 GPR37O15354 613 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 ANGPTL7O43827 346 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 CDC14BO60729 498 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 LILRA1O75019 489 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 NXPH2O95156 264 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 EIF4EP06730 217 aaKnown RBP8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 NAT2P11245 290 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 MGMTP16455 207 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 ELK1P19419 428 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 PTBP1P26599 531 aaKnown RBP eCLIP8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 CD200P41217 278 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 PITPNBP48739 271 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 EFNB3Q15768 340 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 FAM209AQ5JX71 171 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 TRIQKQ629K1 86 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 KRT74Q7RTS7 529 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 CDH24Q86UP0 819 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 TMEM200AQ86VY9 491 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 C1orf87Q8N0U7 546 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 OSR2Q8N2R0 312 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 CELF2-AS1Q8N7Q2 184 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 CHST4Q8NCG5 386 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 OR5H6Q8NGV6 325 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 OR10K1Q8NGX5 313 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 EMG1Q92979 244 aaKnown RBP8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 MRPS24Q96EL2 167 aaKnown RBP8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 NEDD4LQ96PU5 975 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 OR2V2Q96R30 315 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 VRK1Q99986 396 aaPredicted RBP8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 SPOCK3Q9BQ16 436 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 SELENOIQ9C0D9 397 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 ABCG5Q9H222 651 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 BANF2Q9H503 90 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 SAP30LQ9HAJ7 183 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 UFSP2Q9NUQ7 469 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 DNAJB11Q9UBS4 358 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 IL19Q9UHD0 177 aa8.75□□□□□ -1.01
PRPF38A-202ENST00000474048 FAM208BQ5VWN6 2430 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 IGKV1-27A0A075B6S5 117 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 IGHV3-64DA0A0J9YX35 117 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 A1L4Q6 167 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 ZSCAN5BA6NJL1 495 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 C17orf100A8MU93 164 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 C19orf84I3L1E1 186 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 MLNRO43193 412 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 PLAUP00749 431 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 CHRM2P08172 466 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 VSIG8P0DPA2 414 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 PRKACAP17612 351 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 GABRR1P24046 479 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 ZP1P60852 638 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 ZNF154Q13106 437 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 DAZAP2Q15038 168 aaPredicted RBP8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 SMIM21Q3B7S5 101 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 FAM166AQ6J272 317 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 PYHIN1Q6K0P9 492 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 CMTM4Q8IZR5 234 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 OR8H2Q8N162 312 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 SCCPDHQ8NBX0 429 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 ACBD4Q8NC06 268 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 ITLN1Q8WWA0 313 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 NEUROG1Q92886 237 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 BORCS5Q969J3 196 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 ERGIC1Q969X5 290 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 SLC25A28Q96A46 364 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 MEGF10Q96KG7 1140 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 HS3ST6Q96QI5 342 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 TMEM204Q9BSN7 226 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 RAB1BQ9H0U4 201 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 OR51I2Q9H344 312 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 KCNK15Q9H427 330 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 PPP1R3EQ9H7J1 279 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 CBLN4Q9NTU7 201 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 C1orf123Q9NWV4 160 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 IL36GQ9NZH8 169 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 FBLN5Q9UBX5 448 aa8.74□□□□□ -1.01
PRPF38A-202ENST00000474048 WIPF3A6NGB9 483 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 TMEM14DPA8MWL7 114 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 IFNL4K9M1U5 179 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 CDIPTO14735 213 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 CTAG2O75638 210 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 IGHV1-46P01743 117 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 IGFBP2P18065 325 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 BCL3P20749 454 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 GLRA1P23415 457 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 CDK2P24941 298 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 CD40LGP29965 261 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 VEGFCP49767 419 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 PPOXP50336 477 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 SNU13P55769 128 aaKnown RBP8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 GMFBP60983 142 aa8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 RPS27AP62979 156 aaKnown RBP8.73□□□□□ -1.01
PRPF38A-202ENST00000474048 MRPS10P82664 201 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms