RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 POC1AQ8NBT0 407 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 DNAAF1Q8NEP3 725 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 OR13C5Q8NGS8 318 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 ZNF671Q8TAW3 534 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 GPR148Q8TDV2 347 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 BORCS8Q96FH0 119 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 ZNF488Q96MN9 340 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 SSBP3Q9BWW4 388 aaPredicted RBP16.47■□□□□ 0.23
HDAC7-220ENST00000471235 PKIBQ9C010 78 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 Q9H521 79 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 DNAJB11Q9UBS4 358 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 POLDIP2Q9Y2S7 368 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 LSM2Q9Y333 95 aaKnown RBP16.47■□□□□ 0.23
HDAC7-220ENST00000471235 PNMA8CA0A1B0GUJ8 204 aa16.46■□□□□ 0.23
HDAC7-220ENST00000471235 RGS10O43665 173 aa16.46■□□□□ 0.23
HDAC7-220ENST00000471235 PGA5P0DJD9 388 aa16.46■□□□□ 0.23
HDAC7-220ENST00000471235 HOXB4P17483 251 aaPredicted RBP16.46■□□□□ 0.23
HDAC7-220ENST00000471235 GLRA1P23415 457 aa16.46■□□□□ 0.23
HDAC7-220ENST00000471235 SOX2P48431 317 aa16.46■□□□□ 0.23
HDAC7-220ENST00000471235 GNB2P62879 340 aa16.46■□□□□ 0.23
HDAC7-220ENST00000471235 IL17RELQ6ZVW7 336 aa16.46■□□□□ 0.23
HDAC7-220ENST00000471235 SPSB1Q96BD6 273 aa16.46■□□□□ 0.23
HDAC7-220ENST00000471235 C12orf43Q96C57 262 aaKnown RBP16.46■□□□□ 0.23
HDAC7-220ENST00000471235 OPALINQ96PE5 141 aa16.46■□□□□ 0.23
HDAC7-220ENST00000471235 ZCCHC4Q9H5U6 513 aa16.46■□□□□ 0.23
HDAC7-220ENST00000471235 SNTG1Q9NSN8 517 aa16.46■□□□□ 0.23
HDAC7-220ENST00000471235 ZNF281Q9Y2X9 895 aa16.46■□□□□ 0.23
HDAC7-220ENST00000471235 POLR3KQ9Y2Y1 108 aaPredicted RBP16.46■□□□□ 0.23
HDAC7-220ENST00000471235 C2CD3Q4AC94 2353 aa16.46■□□□□ 0.23
HDAC7-220ENST00000471235 SETD2Q9BYW2 2564 aaPredicted RBP16.45■□□□□ 0.22
HDAC7-220ENST00000471235 A0A1B0GW55 424 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 DENRO43583 198 aaKnown RBP16.45■□□□□ 0.22
HDAC7-220ENST00000471235 NDUFA2O43678 99 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 CRLF1O75462 422 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 FCN3O75636 299 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 PLATP00750 562 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 DUX4L2P0CJ85 424 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 DUX4L3P0CJ86 424 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 DUX4L4P0CJ87 422 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 DUX4L5P0CJ88 424 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 DUX4L6P0CJ89 424 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 DUX4L7P0CJ90 424 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 PCMT1P22061 227 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 PRKACBP22694 351 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 IL24Q13007 206 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 FAM120AOSQ5T036 256 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 ASPHD2Q6ICH7 369 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 DUX4L9Q6RFH8 374 aaPredicted RBP16.45■□□□□ 0.22
HDAC7-220ENST00000471235 ZNF841Q6ZN19 808 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 LHFPL2Q6ZUX7 228 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 GHSRQ92847 366 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 OR5M11Q96RB7 305 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 NRIP2Q9BQI9 281 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 SMURF1Q9HCE7 757 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 NLKQ9UBE8 527 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 DUX4Q9UBX2 424 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 DSCAML1Q8TD84 2053 aa16.45■□□□□ 0.22
HDAC7-220ENST00000471235 TRBV5-5A0A0J9YX44 114 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 NOS1APO75052 506 aaPredicted RBP16.44■□□□□ 0.22
HDAC7-220ENST00000471235 TFF1P04155 84 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 OCM2P0CE71 109 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 AMY2BP19961 511 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 RBP2P50120 134 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 ATP1B3P54709 279 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 RPS11P62280 158 aaKnown RBP eCLIP16.44■□□□□ 0.22
HDAC7-220ENST00000471235 BDH1Q02338 343 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 DCAF12L2Q5VW00 463 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 WDR25Q64LD2 544 aaPredicted RBP16.44■□□□□ 0.22
HDAC7-220ENST00000471235 ACP7Q6ZNF0 438 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 SERPINA12Q8IW75 414 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 BATF2Q8N1L9 274 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 FAM216BQ8N7L0 139 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 OR5T2Q8NGG2 359 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 TMIGD2Q96BF3 282 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 CCL13Q99616 98 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 TAS2R4Q9NYW5 299 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 KAAG1Q9UBP8 84 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 CLN8Q9UBY8 286 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 OR5V1Q9UGF6 321 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 CDC42EP3Q9UKI2 254 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 BLOC1S6Q9UL45 172 aa16.44■□□□□ 0.22
HDAC7-220ENST00000471235 PPIAL4CA0A0B4J2A2 164 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 A0A0G2JMP0 313 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 A0A0X1KG70 313 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 NKX6-3A6NJ46 265 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 TRAPPC2LH3BP13 241 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 SULT1B1O43704 296 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 CD2P06729 351 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 CELP19835 753 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 RIPPLY3P57055 190 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 ACSM1Q08AH1 577 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 SPHARQ15513 63 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 SMIM21Q3B7S5 101 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 YIF1BQ5BJH7 314 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 ZNF529Q6P280 563 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 SLC25A26Q70HW3 274 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 PRSS48Q7RTY5 328 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 RNF144BQ7Z419 303 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 OR4M2Q8NGB6 313 aa16.43■□□□□ 0.22
HDAC7-220ENST00000471235 OR5D14Q8NGL3 314 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms