RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 SLC6A7Q99884 636 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 JAM3Q9BX67 310 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 SUCNR1Q9BXA5 334 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 CHST5Q9GZS9 411 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 DCLRE1BQ9H816 532 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 ISG20L2Q9H9L3 353 aaKnown RBP11.71□□□□□ -0.53
TOP3B-215ENST00000470338 FGF20Q9NP95 211 aaPredicted RBP11.71□□□□□ -0.53
TOP3B-215ENST00000470338 ZNF69Q9UC07 566 aa11.71□□□□□ -0.53
TOP3B-215ENST00000470338 IGKV1D-17A0A075B6S4 117 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 OR4C45A6NMZ5 311 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 ZNF879B4DU55 563 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 NDUFB3O43676 98 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 SYNGR1O43759 233 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 GATBO75879 557 aaKnown RBP11.7□□□□□ -0.54
TOP3B-215ENST00000470338 PLATP00750 562 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 SERPINA3P01011 423 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 LIMS3P0CW19 117 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 LIMS4P0CW20 117 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 IGHV4-38-2P0DP08 117 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 PSG2P11465 335 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 MMP9P14780 707 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 FUT6P51993 359 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 FGF12P61328 243 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 MRPL28Q13084 256 aaKnown RBP11.7□□□□□ -0.54
TOP3B-215ENST00000470338 IL18R1Q13478 541 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 ALKBH1Q13686 389 aaKnown RBP11.7□□□□□ -0.54
TOP3B-215ENST00000470338 ACP7Q6ZNF0 438 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 CALHM1Q8IU99 346 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 BPIFB2Q8N4F0 458 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 CNIH3Q8TBE1 160 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 ZFAND2BQ8WV99 257 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 PP6455Q8WZ26 134 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 ST8SIA4Q92187 359 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 PKIBQ9C010 78 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 RPUSD1Q9UJJ7 312 aaKnown RBP11.7□□□□□ -0.54
TOP3B-215ENST00000470338 ZNF222Q9UK12 451 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 SLC7A11Q9UPY5 501 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 STAB1Q9NY15 2570 aa11.7□□□□□ -0.54
TOP3B-215ENST00000470338 IGKV1-27A0A075B6S5 117 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 NKX6-3A6NJ46 265 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 H0YAE9 185 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 SIGLEC5O15389 551 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 TFF1P04155 84 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 SELLP14151 372 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 ERVK11-1P61568 191 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 IL13RA1P78552 427 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 IL24Q13007 206 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 LRRC10Q5BKY1 277 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 C9orf139Q6ZV77 190 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 UTS2BQ765I0 119 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 ANGPTL5Q86XS5 388 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 BCL6BQ8N143 479 aaPredicted RBP11.69□□□□□ -0.54
TOP3B-215ENST00000470338 SETD9Q8NE22 299 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 C8orf46Q8TAG6 207 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 TRMT10AQ8TBZ6 339 aaKnown RBP11.69□□□□□ -0.54
TOP3B-215ENST00000470338 C22orf15Q8WYQ4 148 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 ADAT3Q96EY9 351 aaPredicted RBP11.69□□□□□ -0.54
TOP3B-215ENST00000470338 SDSLQ96GA7 329 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 ZNF488Q96MN9 340 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 WDFY2Q96P53 400 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 JMJD8Q96S16 334 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 NRIP2Q9BQI9 281 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 C19orf24Q9BVV8 132 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 SIRPDQ9H106 197 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 CNTD2Q9H8S5 307 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 HES4Q9HCC6 221 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 HHLA2Q9UM44 414 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 POLDIP2Q9Y2S7 368 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 HSPE1-MOB4S4R3N1 261 aa11.69□□□□□ -0.54
TOP3B-215ENST00000470338 DSCAML1Q8TD84 2053 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 FAM230AA0A1W2PPH8 454 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 E9PI62 339 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 RGS9O75916 674 aaPredicted RBP11.68□□□□□ -0.54
TOP3B-215ENST00000470338 TOX4O94842 621 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 RPSAP08865 295 aaKnown RBP11.68□□□□□ -0.54
TOP3B-215ENST00000470338 DCKP27707 260 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 CAPGP40121 348 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 CAV3P56539 151 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 IKZF1Q13422 519 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 DGUOKQ16854 277 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 SMIM21Q3B7S5 101 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 DNAAF1Q8NEP3 725 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 OR51A4Q8NGJ6 313 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 OR10AC1Q8NH08 325 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 HAVCR2Q8TDQ0 301 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 NPRL2Q8WTW4 380 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 FGGYQ96C11 551 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 TBX15Q96SF7 602 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 DCTN5Q9BTE1 182 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 MS4A7Q9GZW8 240 aaPredicted RBP11.68□□□□□ -0.54
TOP3B-215ENST00000470338 SLC25A10Q9UBX3 287 aaPredicted RBP11.68□□□□□ -0.54
TOP3B-215ENST00000470338 NKX1-2Q9UD57 310 aaPredicted RBP11.68□□□□□ -0.54
TOP3B-215ENST00000470338 MAB21L2Q9Y586 359 aa11.68□□□□□ -0.54
TOP3B-215ENST00000470338 IGHV3OR16-10A0A075B7F0 116 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 TRAV40A0A0B4J280 105 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 IGKV1-9A0A0C4DH69 117 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 IRGMA1A4Y4 181 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 RFPL4AA6NLU0 287 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 RFPL4AL1F8VTS6 287 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 ZFPL1O95159 310 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms