RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 LPAR6P43657 344 aa12.88□□□□□ -0.35
PRPF38B-204ENST00000467302 HOXA1P49639 335 aaPredicted RBP12.88□□□□□ -0.35
PRPF38B-204ENST00000467302 SPEM2Q0P670 501 aa12.88□□□□□ -0.35
PRPF38B-204ENST00000467302 TMEM176BQ3YBM2 270 aaPredicted RBP12.88□□□□□ -0.35
PRPF38B-204ENST00000467302 SHEQ5VZ18 495 aa12.88□□□□□ -0.35
PRPF38B-204ENST00000467302 RPL7L1Q6DKI1 246 aaKnown RBP12.88□□□□□ -0.35
PRPF38B-204ENST00000467302 Q6ZSR3 168 aa12.88□□□□□ -0.35
PRPF38B-204ENST00000467302 TIPARPQ7Z3E1 657 aaKnown RBP12.88□□□□□ -0.35
PRPF38B-204ENST00000467302 PGAM5Q96HS1 289 aa12.88□□□□□ -0.35
PRPF38B-204ENST00000467302 HRH4Q9H3N8 390 aa12.88□□□□□ -0.35
PRPF38B-204ENST00000467302 SH2D2AQ9NP31 389 aa12.88□□□□□ -0.35
PRPF38B-204ENST00000467302 GSKIPQ9P0R6 139 aa12.88□□□□□ -0.35
PRPF38B-204ENST00000467302 FAM96BQ9Y3D0 163 aa12.88□□□□□ -0.35
PRPF38B-204ENST00000467302 STMND1H3BQB6 276 aa12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 MASP2O00187 686 aa12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 LRP3O75074 770 aa12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 HOXB5P09067 269 aa12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 ZNF806P0C7X5 589 aa12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 ZNF708P17019 499 aa12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 RFC3P40938 356 aa12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 EIF5AP63241 154 aaKnown RBP12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 CHAF1BQ13112 559 aa12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 RBM39Q14498 530 aaKnown RBP12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 SSPNQ14714 243 aa12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 PPA1Q15181 289 aa12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 RSPO1Q2MKA7 263 aaPredicted RBP12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 TAF9BQ9HBM6 251 aa12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 PROK2Q9HC23 129 aa12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 TMEM9BQ9NQ34 198 aa12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 MEMO1Q9Y316 297 aa12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 NCOA6Q14686 2063 aaPredicted RBP12.87□□□□□ -0.35
PRPF38B-204ENST00000467302 IGKV1D-8A0A087WSZ0 117 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 CCDC187A0A096LP49 1063 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 RRP8O43159 456 aaKnown RBP12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 DHRS3O75911 302 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 IFNA2P01563 188 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 S100A10P60903 97 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 H3F3AP84243 136 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 CHRFAM7AQ494W8 412 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 TMEM268Q5VZI3 342 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 EIF5AL1Q6IS14 154 aaKnown RBP12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 NPRL2Q8WTW4 380 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 PP6455Q8WZ26 134 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 NTNG2Q96CW9 530 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 GNRHR2Q96P88 292 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 CNTNAP3Q9BZ76 1288 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 CHST5Q9GZS9 411 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 DECR2Q9NUI1 292 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 C1orf123Q9NWV4 160 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 MCTS1Q9ULC4 181 aaKnown RBP12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 C9orf172C9J069 976 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 GALR2O43603 387 aaPredicted RBP12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 TLX3O43711 291 aaPredicted RBP12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 KNG1P01042 644 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 CD5P06127 495 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 FCGR3AP08637 254 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 FAHP16930 419 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 RCC1P18754 421 aaPredicted RBP12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 SERPINA2P20848 420 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 MSR1P21757 451 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 CPT2P23786 658 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 SULT1A2P50226 295 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 RAB13P51153 203 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 DSCR4P56555 118 aaPredicted RBP12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 CLDN17P56750 224 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 SLC35A1P78382 337 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 ENDOGQ14249 297 aaKnown RBP12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 ARL6IP1Q15041 203 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 C10orf128Q5T292 105 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 BTNL8Q6UX41 500 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 HAS2Q92819 552 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 SPRY4Q9C004 299 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 ZFP57Q9NU63 452 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 PLA2G2EQ9NZK7 142 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 LHX6Q9UPM6 363 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 C14orf166Q9Y224 244 aaKnown RBP12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 MED12Q93074 2177 aa12.86□□□□□ -0.35
PRPF38B-204ENST00000467302 CFAP54Q96N23 3096 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 GPR179Q6PRD1 2367 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 DHRS7CA6NNS2 312 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 MT-CO3P00414 261 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 SFTPBP07988 381 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 FCGR2AP12318 317 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 LIFP15018 202 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 OTX1P32242 354 aaPredicted RBP12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 ECI1P42126 302 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 ZNF133P52736 654 aaPredicted RBP12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 HIST1H3AP68431 136 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 PHYHD1Q5SRE7 291 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 HIST2H3PS2Q5TEC6 136 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 TMEM164Q5U3C3 297 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 RTL6Q6ICC9 239 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 OR2A2Q6IF42 318 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 FOXL2NBQ6ZUU3 175 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 HIST2H3AQ71DI3 136 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 GJC3Q8NFK1 279 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 DMBX1Q8NFW5 382 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 SEMA6DQ8NFY4 1073 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 NABP1Q96AH0 204 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 SGCZQ96LD1 299 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms